Gene
RNA
| Item | Value |
|---|---|
| gene id | G1549270 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 41637322 ~ 41638401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110496273 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1772721 | True | 993 | TUCP | 0.36 | 2 | 41637322 | 41638401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941166 | LOC106588349 | coding | upstream | 1010 | 41635539 ~ 41636312 (+) |
| LOC118941050 | NA | coding | upstream | 38337 | 41597924 ~ 41598985 (+) |
| LOC110496270 | LOC106588283 | coding | upstream | 40152 | 41595185 ~ 41597170 (+) |
| LOC110496268 | LOC106588354 | coding | upstream | 117330 | 41513156 ~ 41519992 (+) |
| tmem65 | LOC106569922 | coding | upstream | 431723 | 41183357 ~ 41205599 (+) |
| LOC110496278 | LOC106588345 | coding | downstream | 40146 | 41667929 ~ 41713715 (+) |
| LOC110496280 | NA | coding | downstream | 78688 | 41717089 ~ 41718773 (+) |
| LOC110496820 | LOC106588341 | coding | downstream | 123441 | 41761842 ~ 41774862 (+) |
| LOC110496934 | NA | coding | downstream | 180051 | 41818452 ~ 41821362 (+) |
| psb4 | psb4 | coding | downstream | 203395 | 41841796 ~ 41846073 (+) |
| G1549290 | NA | non-coding | upstream | 69503 | 41564573 ~ 41567819 (+) |
| G1549262 | NA | non-coding | upstream | 103660 | 41531385 ~ 41533662 (+) |
| G1549238 | NA | non-coding | upstream | 136634 | 41500472 ~ 41500688 (+) |
| G1549231 | NA | non-coding | upstream | 140547 | 41496307 ~ 41496775 (+) |
| G1549127 | NA | non-coding | upstream | 214555 | 41422491 ~ 41422767 (+) |
| G1549267 | NA | non-coding | downstream | 5629 | 41644030 ~ 41644976 (+) |
| G1549268 | LOC106588348 | non-coding | downstream | 12220 | 41650621 ~ 41653891 (+) |
| G1549326 | LOC106569910 | non-coding | downstream | 21133 | 41659534 ~ 41660155 (+) |
| G1549349 | NA | non-coding | downstream | 78251 | 41716652 ~ 41782077 (+) |
| G1548171 | ndufb9 | other | upstream | 468220 | 41165554 ~ 41169102 (+) |
| LOC110496251 | LOC106569933 | other | upstream | 898847 | 40736719 ~ 40738475 (+) |
| G1547904 | NA | other | upstream | 919578 | 40708018 ~ 40717744 (+) |
| G1547834 | rps18 | other | upstream | 1165740 | 40469109 ~ 40471582 (+) |
| G1547817 | NA | other | upstream | 1207802 | 40427108 ~ 40429520 (+) |
| LOC110496287 | LOC106588335 | other | downstream | 265142 | 41903543 ~ 41922276 (+) |
| LOC110496935 | LOC106588280 | other | downstream | 364418 | 42002708 ~ 42004496 (+) |
| G1549511 | NA | other | downstream | 398875 | 42037276 ~ 42040912 (+) |
| G1549676 | NA | other | downstream | 706585 | 42344986 ~ 42345754 (+) |
