Gene
RNA
| Item | Value |
|---|---|
| gene id | G1549941 |
| gene name | LOC106588337 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 41874057 ~ 41875450 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retinol dehydrogenase 11-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773484 | True | 655 | lncRNA | 0.44 | 2 | 41874057 | 41875450 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496284 | LOC106588339 | coding | downstream | 32801 | 41829155 ~ 41841256 (-) |
| LOC110496283 | LOC106588340 | coding | downstream | 61898 | 41779561 ~ 41812159 (-) |
| LOC110496281 | LOC106588342 | coding | downstream | 121993 | 41723314 ~ 41752064 (-) |
| LOC110496279 | LOC106588343 | coding | downstream | 152095 | 41704525 ~ 41721962 (-) |
| LOC110496277 | LOC106588347 | coding | downstream | 202541 | 41663436 ~ 41671516 (-) |
| LOC110496288 | LOC106588334 | coding | upstream | 70812 | 41946262 ~ 41962098 (-) |
| LOC110496289 | jtb | coding | upstream | 134399 | 42009849 ~ 42014114 (-) |
| LOC110496292 | LOC106588330 | coding | upstream | 152840 | 42028290 ~ 42035215 (-) |
| LOC110496293 | tcpg | coding | upstream | 161824 | 42037274 ~ 42046633 (-) |
| LOC110496294 | LOC106588328 | coding | upstream | 172651 | 42048101 ~ 42056179 (-) |
| G1549939 | LOC106588337 | non-coding | downstream | 1028 | 41872127 ~ 41873029 (-) |
| G1549888 | psb4 | non-coding | downstream | 31000 | 41841712 ~ 41843057 (-) |
| G1549861 | NA | non-coding | downstream | 224338 | 41649488 ~ 41649719 (-) |
| LOC110496274 | NA | non-coding | downstream | 229409 | 41618290 ~ 41645613 (-) |
| G1549241 | NA | non-coding | downstream | 371764 | 41502018 ~ 41502293 (-) |
| G1549942 | NA | non-coding | upstream | 25725 | 41901175 ~ 41923079 (-) |
| G1549970 | NA | non-coding | upstream | 51279 | 41926729 ~ 41927158 (-) |
| G1549971 | NA | non-coding | upstream | 51885 | 41927335 ~ 41927572 (-) |
| G1549972 | NA | non-coding | upstream | 52520 | 41927970 ~ 41928469 (-) |
| G1549973 | NA | non-coding | upstream | 54328 | 41929778 ~ 41930004 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 965432 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1188416 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1482174 | 40385970 ~ 40391883 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 2185376 | 39642841 ~ 39688750 (-) |
| G1550177 | LOC106569881 | other | upstream | 439836 | 42315286 ~ 42316079 (-) |
| G1550202 | NA | other | upstream | 483698 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 1019581 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1755556 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2945313 | 44820763 ~ 44828808 (-) |
