Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550006 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 41972538 ~ 41972767 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773558 | True | 230 | lncRNA | 0.36 | 1 | 41972538 | 41972767 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496288 | LOC106588334 | coding | downstream | 10440 | 41946262 ~ 41962098 (-) |
| LOC110496284 | LOC106588339 | coding | downstream | 131282 | 41829155 ~ 41841256 (-) |
| LOC110496283 | LOC106588340 | coding | downstream | 160379 | 41779561 ~ 41812159 (-) |
| LOC110496281 | LOC106588342 | coding | downstream | 220474 | 41723314 ~ 41752064 (-) |
| LOC110496279 | LOC106588343 | coding | downstream | 250576 | 41704525 ~ 41721962 (-) |
| LOC110496289 | jtb | coding | upstream | 37082 | 42009849 ~ 42014114 (-) |
| LOC110496292 | LOC106588330 | coding | upstream | 55523 | 42028290 ~ 42035215 (-) |
| LOC110496293 | tcpg | coding | upstream | 64507 | 42037274 ~ 42046633 (-) |
| LOC110496294 | LOC106588328 | coding | upstream | 75334 | 42048101 ~ 42056179 (-) |
| LOC110496296 | LOC106588326 | coding | upstream | 83620 | 42056387 ~ 42075432 (-) |
| G1549977 | NA | non-coding | downstream | 30372 | 41941726 ~ 41942166 (-) |
| G1549973 | NA | non-coding | downstream | 42534 | 41929778 ~ 41930004 (-) |
| G1549972 | NA | non-coding | downstream | 44069 | 41927970 ~ 41928469 (-) |
| G1549971 | NA | non-coding | downstream | 44966 | 41927335 ~ 41927572 (-) |
| G1549970 | NA | non-coding | downstream | 45380 | 41926729 ~ 41927158 (-) |
| G1550020 | NA | non-coding | upstream | 20086 | 41992853 ~ 41993106 (-) |
| LOC100135825 | tyr | non-coding | upstream | 115468 | 42088179 ~ 42093200 (-) |
| G1549997 | NA | non-coding | upstream | 129681 | 42102448 ~ 42102902 (-) |
| G1549996 | NA | non-coding | upstream | 131125 | 42103892 ~ 42104540 (-) |
| G1550073 | NA | non-coding | upstream | 196299 | 42169066 ~ 42169326 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 301024 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1063913 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1286897 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1580655 | 40385970 ~ 40391883 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 2283857 | 39642841 ~ 39688750 (-) |
| G1550177 | LOC106569881 | other | upstream | 342519 | 42315286 ~ 42316079 (-) |
| G1550202 | NA | other | upstream | 386381 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 922264 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1658239 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2847996 | 44820763 ~ 44828808 (-) |
