G1550124


Basic Information

Item Value
gene id G1550124
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42289865 ~ 42291075 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1773692
cttcccagaagagtggaggctgttatagcagcaaaggggggaccaactccaaattaatgcccatgattttggaattcgatgcgcaggtgtccacatacttttggtcatgtagtgcaatTTGTAAAGGACCTAAGTACAAGTTAATTCTACTTCTGATCTTATATTTTAACAATACCATAAGTTCCTCTGTAGCAATTGTAATTATTCTATAGTACAACATTGCATTGTAGTTGAgattagtgttttttttttcttcttgaaCAGTCCCTGTAATTAAAATGTCTCAACTCATAGCTTTATCACACAGCAATTCATTATGTAACGGTTAATACATCATTTGAATAATTACAGGGTTACTACCCAAACAACACTATAAATTACCTTTGTTGAAAGCCTAATGGTCTACTTATTGGTAGATCTTGTCGATAAAAGTGCATGTCCGTGATTTTGAATAGTCAAGAATATGCACGCATTTCAATATATTCTCCcctatgtatttatttggacagtgaagctaaaacctTTAATTTGTCTATACTCCagcatagtccccccatttgaaggtgtcataagtatttggacaaattataGTGTAGTAAATTTTGTAAAAAGTTTAGCATTTGGTCCCATATGCCTATTTACTAACacaataagtgaatttgtccaaataattATGACACTTTCAAATAGGGGGACTAGATACacaaagtgctttcatttctaaaactacaacatatgtatgaaaatactcTAAAACAAAACCTTTCAACCTTTGATCTCAAATCCAGGTTTTCTGTCAAAATAAATAGGCAGGGGAGTGTATGAGTTTgacatagggggggggggggcattggggtcgcctttttcttttttttttaacaatgagGGTAGAAATATGTccttactggccctccaacacaacacttccagcagcatctggtcttccAGCCAAGCGTTGACTTCATCAAAAGATGACAATTTCATACATTTGCAATGAAGTTGGATTGTTGGGTACCTGTAATTAGTAGGCAAATTGCTTCGTCTTTGAGTAACCTAGTTGATAAATTTCACTTCAATGTGAAAGAATGCAAATGAAAACAGATTATTGCCATTTTGATTGTGACTTGTCAATTAACCTGTCATACTTTTTGTAAAATGGTTTTAGTGTCTATGTATTTGAACATCAATCTAAATAAAGAGAATAAGCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1773692 True 1211 lncRNA 0.35 1 42289865 42291075

Neighbor

gene id symbol gene type direction distance location
LOC110496299 LOC106569884 coding downstream 2933 42279525 ~ 42286932 (-)
LOC110496297 LOC106588322 coding downstream 21775 42145158 ~ 42268090 (-)
LOC110496298 LOC106588323 coding downstream 157646 42105604 ~ 42132219 (-)
LOC100135825 tyr coding downstream 196665 42088179 ~ 42093200 (-)
LOC110496296 LOC106588326 coding downstream 214433 42056387 ~ 42075432 (-)
LOC110496300 LOC106588320 coding upstream 592 42291667 ~ 42297772 (-)
stom stom coding upstream 149270 42440345 ~ 42451777 (-)
LOC110496307 LOC106588314 coding upstream 248252 42539327 ~ 42542965 (-)
LOC110496309 thap7 coding upstream 264649 42555724 ~ 42588918 (-)
LOC110496310 LOC106588521 coding upstream 326999 42618074 ~ 42624506 (-)
G1550157 NA non-coding downstream 18970 42270280 ~ 42270895 (-)
G1550104 NA non-coding downstream 97721 42191862 ~ 42192144 (-)
G1550073 NA non-coding downstream 120539 42169066 ~ 42169326 (-)
G1549996 NA non-coding downstream 185325 42103892 ~ 42104540 (-)
G1550170 NA non-coding upstream 16402 42307477 ~ 42307699 (-)
G1550175 NA non-coding upstream 22676 42313751 ~ 42314044 (-)
G1550178 NA non-coding upstream 26723 42317798 ~ 42318049 (-)
G1550181 NA non-coding upstream 31596 42322671 ~ 42323020 (-)
G1550182 NA non-coding upstream 36363 42327438 ~ 42327775 (-)
LOC110496277 LOC106588347 other downstream 618351 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 1381240 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1604224 40640175 ~ 40685641 (-)
G1548367 NA other downstream 1897982 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 2601184 39642841 ~ 39688750 (-)
G1550177 LOC106569881 other upstream 24211 42315286 ~ 42316079 (-)
G1550202 NA other upstream 68073 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 603956 42895031 ~ 43015119 (-)
LOC118940987 NA other upstream 1339931 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 2529688 44820763 ~ 44828808 (-)

Expression


Co-expression Network