G1550177 (LOC106569881)


Basic Information

Item Value
gene id G1550177
gene name LOC106569881
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42315286 ~ 42316079 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1773748
ggAAAATATATAATTTATCCTATAGACTTTGCACAATGCTTTTGCACTATGAATATGTCTATATAGTATCAATTGTATATTGTGTATTCAttcatgtacactgagtgtacaaaacatgctctttccgtgacatagactgatctcacctgttaaatccacttcaatcagtgtagatgaaggagacaatcgagacatggattgtgtatgtgtgccattcagagggtgaattggcaagagaaaagatttaagtgcctttgaacgggatatggtaggtagtaggtgccaggcgcagcagtgtgtcaagaactgcaacgctactgggcttttcacgctcaacagtttcccgtgtgtatcaagaatggtccaaaggacatccagcaaacttgacacaactgtgggaagcattggagtcaacatgggccagcatccctatggaacgctttcaacatcttgtagagtccacgggctgttgaattgaggctgttctgagggcaaaagggggtgcaactcaaaatGAGGAAGTCCCTCTCTTTTTACTACTGTATGACCCACCTGCAGGCGTCCGTCCAGGGTCCTCTGGATGGTGACACACTTGCTGGGGTGCACACCGTTGGTGGTGATGGCGGTGATGAGCGAGTCCAGCTCGTCCTTCTTCTCCTTGAGCTTCTTCACCAGGCTCTCGATGGCACGCTTGGCGAAACCCTCATTCTCGCCACCCTGCCGGTGGCACATGAGGCTGTGCACGATGCTCAGGCAGGCGTCATTGCTGCTGGGGGCGTTTACCGACATGATGC

Function

NR:

description
PREDICTED: mothers against decapentaplegic homolog 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1773748 True 794 TUCP 0.48 1 42315286 42316079

Neighbor

gene id symbol gene type direction distance location
LOC110496300 LOC106588320 coding downstream 17514 42291667 ~ 42297772 (-)
LOC110496299 LOC106569884 coding downstream 28354 42279525 ~ 42286932 (-)
LOC110496297 LOC106588322 coding downstream 47196 42145158 ~ 42268090 (-)
LOC110496298 LOC106588323 coding downstream 183067 42105604 ~ 42132219 (-)
LOC100135825 tyr coding downstream 222086 42088179 ~ 42093200 (-)
stom stom coding upstream 124266 42440345 ~ 42451777 (-)
LOC110496307 LOC106588314 coding upstream 223248 42539327 ~ 42542965 (-)
LOC110496309 thap7 coding upstream 239645 42555724 ~ 42588918 (-)
LOC110496310 LOC106588521 coding upstream 301995 42618074 ~ 42624506 (-)
LOC110496315 NA coding upstream 472441 42788520 ~ 42804428 (-)
G1550175 NA non-coding downstream 1242 42313751 ~ 42314044 (-)
G1550170 NA non-coding downstream 7587 42307477 ~ 42307699 (-)
G1550124 NA non-coding downstream 24211 42289865 ~ 42291075 (-)
G1550157 NA non-coding downstream 44391 42270280 ~ 42270895 (-)
G1550178 NA non-coding upstream 1719 42317798 ~ 42318049 (-)
G1550181 NA non-coding upstream 6592 42322671 ~ 42323020 (-)
G1550182 NA non-coding upstream 11359 42327438 ~ 42327775 (-)
G1550183 NA non-coding upstream 11904 42327983 ~ 42328243 (-)
G1550185 NA non-coding upstream 15217 42331296 ~ 42331510 (-)
LOC110496277 LOC106588347 other downstream 643772 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 1406661 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1629645 40640175 ~ 40685641 (-)
G1548367 NA other downstream 1923403 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 2626605 39642841 ~ 39688750 (-)
G1550202 NA other upstream 43069 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 578952 42895031 ~ 43015119 (-)
LOC118940987 NA other upstream 1314927 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 2504684 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 2731601 45047680 ~ 45087786 (-)

Expression


Co-expression Network