Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42327438 ~ 42327775 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109102586 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773753 | True | 338 | lncRNA | 0.37 | 1 | 42327438 | 42327775 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496300 | LOC106588320 | coding | downstream | 29666 | 42291667 ~ 42297772 (-) |
| LOC110496299 | LOC106569884 | coding | downstream | 40506 | 42279525 ~ 42286932 (-) |
| LOC110496297 | LOC106588322 | coding | downstream | 59348 | 42145158 ~ 42268090 (-) |
| LOC110496298 | LOC106588323 | coding | downstream | 195219 | 42105604 ~ 42132219 (-) |
| LOC100135825 | tyr | coding | downstream | 234238 | 42088179 ~ 42093200 (-) |
| stom | stom | coding | upstream | 112570 | 42440345 ~ 42451777 (-) |
| LOC110496307 | LOC106588314 | coding | upstream | 211552 | 42539327 ~ 42542965 (-) |
| LOC110496309 | thap7 | coding | upstream | 227949 | 42555724 ~ 42588918 (-) |
| LOC110496310 | LOC106588521 | coding | upstream | 290299 | 42618074 ~ 42624506 (-) |
| LOC110496315 | NA | coding | upstream | 460745 | 42788520 ~ 42804428 (-) |
| G1550181 | NA | non-coding | downstream | 4418 | 42322671 ~ 42323020 (-) |
| G1550178 | NA | non-coding | downstream | 9389 | 42317798 ~ 42318049 (-) |
| G1550175 | NA | non-coding | downstream | 13394 | 42313751 ~ 42314044 (-) |
| G1550170 | NA | non-coding | downstream | 19739 | 42307477 ~ 42307699 (-) |
| G1550124 | NA | non-coding | downstream | 36363 | 42289865 ~ 42291075 (-) |
| G1550183 | NA | non-coding | upstream | 208 | 42327983 ~ 42328243 (-) |
| G1550185 | NA | non-coding | upstream | 3521 | 42331296 ~ 42331510 (-) |
| G1550186 | NA | non-coding | upstream | 4222 | 42331997 ~ 42332369 (-) |
| G1550187 | NA | non-coding | upstream | 5714 | 42333489 ~ 42333794 (-) |
| G1550188 | NA | non-coding | upstream | 6518 | 42334293 ~ 42334520 (-) |
| G1550177 | LOC106569881 | other | downstream | 11359 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 655924 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1418813 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1641797 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1935555 | 40385970 ~ 40391883 (-) |
| G1550202 | NA | other | upstream | 31373 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 567256 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1303231 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2492988 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2719905 | 45047680 ~ 45087786 (-) |
