Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550188 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42334293 ~ 42334520 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773759 | True | 228 | lncRNA | 0.40 | 1 | 42334293 | 42334520 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496300 | LOC106588320 | coding | downstream | 36521 | 42291667 ~ 42297772 (-) |
| LOC110496299 | LOC106569884 | coding | downstream | 47361 | 42279525 ~ 42286932 (-) |
| LOC110496297 | LOC106588322 | coding | downstream | 66203 | 42145158 ~ 42268090 (-) |
| LOC110496298 | LOC106588323 | coding | downstream | 202074 | 42105604 ~ 42132219 (-) |
| LOC100135825 | tyr | coding | downstream | 241093 | 42088179 ~ 42093200 (-) |
| stom | stom | coding | upstream | 105825 | 42440345 ~ 42451777 (-) |
| LOC110496307 | LOC106588314 | coding | upstream | 204807 | 42539327 ~ 42542965 (-) |
| LOC110496309 | thap7 | coding | upstream | 221204 | 42555724 ~ 42588918 (-) |
| LOC110496310 | LOC106588521 | coding | upstream | 283554 | 42618074 ~ 42624506 (-) |
| LOC110496315 | NA | coding | upstream | 454000 | 42788520 ~ 42804428 (-) |
| G1550187 | NA | non-coding | downstream | 499 | 42333489 ~ 42333794 (-) |
| G1550186 | NA | non-coding | downstream | 1924 | 42331997 ~ 42332369 (-) |
| G1550185 | NA | non-coding | downstream | 2783 | 42331296 ~ 42331510 (-) |
| G1550183 | NA | non-coding | downstream | 6050 | 42327983 ~ 42328243 (-) |
| G1550182 | NA | non-coding | downstream | 6518 | 42327438 ~ 42327775 (-) |
| G1550190 | LOC106588319 | non-coding | upstream | 1762 | 42336282 ~ 42336508 (-) |
| G1550191 | NA | non-coding | upstream | 2395 | 42336915 ~ 42337136 (-) |
| G1550192 | NA | non-coding | upstream | 3337 | 42337857 ~ 42338157 (-) |
| G1550193 | NA | non-coding | upstream | 3854 | 42338374 ~ 42338599 (-) |
| G1550123 | NA | non-coding | upstream | 5513 | 42340033 ~ 42345780 (-) |
| G1550177 | LOC106569881 | other | downstream | 18214 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 662779 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1425668 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1648652 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1942410 | 40385970 ~ 40391883 (-) |
| G1550202 | NA | other | upstream | 24628 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 560511 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1296486 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2486243 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2713160 | 45047680 ~ 45087786 (-) |
