Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550193 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42338374 ~ 42338599 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mothers against decapentaplegic homolog 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773764 | True | 226 | lncRNA | 0.52 | 1 | 42338374 | 42338599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496300 | LOC106588320 | coding | downstream | 40602 | 42291667 ~ 42297772 (-) |
| LOC110496299 | LOC106569884 | coding | downstream | 51442 | 42279525 ~ 42286932 (-) |
| LOC110496297 | LOC106588322 | coding | downstream | 70284 | 42145158 ~ 42268090 (-) |
| LOC110496298 | LOC106588323 | coding | downstream | 206155 | 42105604 ~ 42132219 (-) |
| LOC100135825 | tyr | coding | downstream | 245174 | 42088179 ~ 42093200 (-) |
| stom | stom | coding | upstream | 101746 | 42440345 ~ 42451777 (-) |
| LOC110496307 | LOC106588314 | coding | upstream | 200728 | 42539327 ~ 42542965 (-) |
| LOC110496309 | thap7 | coding | upstream | 217125 | 42555724 ~ 42588918 (-) |
| LOC110496310 | LOC106588521 | coding | upstream | 279475 | 42618074 ~ 42624506 (-) |
| LOC110496315 | NA | coding | upstream | 449921 | 42788520 ~ 42804428 (-) |
| G1550192 | NA | non-coding | downstream | 217 | 42337857 ~ 42338157 (-) |
| G1550191 | NA | non-coding | downstream | 1238 | 42336915 ~ 42337136 (-) |
| G1550190 | LOC106588319 | non-coding | downstream | 1866 | 42336282 ~ 42336508 (-) |
| G1550188 | NA | non-coding | downstream | 3854 | 42334293 ~ 42334520 (-) |
| G1550187 | NA | non-coding | downstream | 4580 | 42333489 ~ 42333794 (-) |
| G1550123 | NA | non-coding | upstream | 1434 | 42340033 ~ 42345780 (-) |
| G1550122 | NA | non-coding | upstream | 7307 | 42345906 ~ 42347312 (-) |
| G1550195 | NA | non-coding | upstream | 9145 | 42347744 ~ 42347955 (-) |
| G1550196 | NA | non-coding | upstream | 9779 | 42348378 ~ 42348592 (-) |
| G1550197 | NA | non-coding | upstream | 10696 | 42349295 ~ 42349573 (-) |
| G1550177 | LOC106569881 | other | downstream | 22295 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 666860 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1429749 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1652733 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1946491 | 40385970 ~ 40391883 (-) |
| G1550202 | NA | other | upstream | 20549 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 556432 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1292407 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2482164 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2709081 | 45047680 ~ 45087786 (-) |
