Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550198 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42349978 ~ 42350205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1773769 | True | 228 | lncRNA | 0.41 | 1 | 42349978 | 42350205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496300 | LOC106588320 | coding | downstream | 52206 | 42291667 ~ 42297772 (-) |
| LOC110496299 | LOC106569884 | coding | downstream | 63046 | 42279525 ~ 42286932 (-) |
| LOC110496297 | LOC106588322 | coding | downstream | 81888 | 42145158 ~ 42268090 (-) |
| LOC110496298 | LOC106588323 | coding | downstream | 217759 | 42105604 ~ 42132219 (-) |
| LOC100135825 | tyr | coding | downstream | 256778 | 42088179 ~ 42093200 (-) |
| stom | stom | coding | upstream | 90140 | 42440345 ~ 42451777 (-) |
| LOC110496307 | LOC106588314 | coding | upstream | 189122 | 42539327 ~ 42542965 (-) |
| LOC110496309 | thap7 | coding | upstream | 205519 | 42555724 ~ 42588918 (-) |
| LOC110496310 | LOC106588521 | coding | upstream | 267869 | 42618074 ~ 42624506 (-) |
| LOC110496315 | NA | coding | upstream | 438315 | 42788520 ~ 42804428 (-) |
| G1550197 | NA | non-coding | downstream | 405 | 42349295 ~ 42349573 (-) |
| G1550196 | NA | non-coding | downstream | 1386 | 42348378 ~ 42348592 (-) |
| G1550195 | NA | non-coding | downstream | 2023 | 42347744 ~ 42347955 (-) |
| G1550122 | NA | non-coding | downstream | 2666 | 42345906 ~ 42347312 (-) |
| G1550123 | NA | non-coding | downstream | 4198 | 42340033 ~ 42345780 (-) |
| G1550200 | NA | non-coding | upstream | 6181 | 42356386 ~ 42356660 (-) |
| G1550201 | NA | non-coding | upstream | 7520 | 42357725 ~ 42358037 (-) |
| G1550231 | NA | non-coding | upstream | 58595 | 42408800 ~ 42409501 (-) |
| G1550237 | pex11b | non-coding | upstream | 61522 | 42411727 ~ 42502927 (-) |
| G1550245 | NA | non-coding | upstream | 71042 | 42421247 ~ 42423756 (-) |
| G1550177 | LOC106569881 | other | downstream | 33899 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 678464 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1441353 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1664337 | 40640175 ~ 40685641 (-) |
| G1548367 | NA | other | downstream | 1958095 | 40385970 ~ 40391883 (-) |
| G1550202 | NA | other | upstream | 8943 | 42359148 ~ 42359628 (-) |
| LOC118936491 | LOC106588302 | other | upstream | 544826 | 42895031 ~ 43015119 (-) |
| LOC118940987 | NA | other | upstream | 1280801 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2470558 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2697475 | 45047680 ~ 45087786 (-) |
