Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42624726 ~ 42625121 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109907445 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1774025 | True | 396 | lncRNA | 0.35 | 1 | 42624726 | 42625121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496310 | LOC106588521 | coding | downstream | 220 | 42618074 ~ 42624506 (-) |
| LOC110496309 | thap7 | coding | downstream | 35808 | 42555724 ~ 42588918 (-) |
| LOC110496307 | LOC106588314 | coding | downstream | 81761 | 42539327 ~ 42542965 (-) |
| stom | stom | coding | downstream | 172949 | 42440345 ~ 42451777 (-) |
| LOC110496300 | LOC106588320 | coding | downstream | 326954 | 42291667 ~ 42297772 (-) |
| LOC110496315 | NA | coding | upstream | 163399 | 42788520 ~ 42804428 (-) |
| LOC110496317 | LOC106588307 | coding | upstream | 233750 | 42858871 ~ 42866233 (-) |
| LOC118936491 | LOC106588302 | coding | upstream | 336855 | 42895031 ~ 43015119 (-) |
| LOC110496326 | NA | coding | upstream | 370330 | 42995451 ~ 43005501 (-) |
| LOC110496330 | LOC106588299 | coding | upstream | 603810 | 43228931 ~ 43258006 (-) |
| G1550417 | LOC106588274 | non-coding | downstream | 10142 | 42613695 ~ 42614584 (-) |
| G1550289 | NA | non-coding | downstream | 115873 | 42508595 ~ 42508853 (-) |
| G1550288 | NA | non-coding | downstream | 118169 | 42503286 ~ 42506557 (-) |
| G1550234 | NA | non-coding | downstream | 123432 | 42499786 ~ 42501294 (-) |
| G1550423 | NA | non-coding | upstream | 674 | 42625795 ~ 42626027 (-) |
| G1550508 | NA | non-coding | upstream | 15122 | 42640243 ~ 42723707 (-) |
| G1550519 | LOC106588312 | non-coding | upstream | 58192 | 42683313 ~ 42684859 (-) |
| G1550556 | NA | non-coding | upstream | 76203 | 42701324 ~ 42747352 (-) |
| G1550563 | NA | non-coding | upstream | 82337 | 42707458 ~ 42710160 (-) |
| G1550202 | NA | other | downstream | 265098 | 42359148 ~ 42359628 (-) |
| G1550177 | LOC106569881 | other | downstream | 308647 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 953212 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1716101 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 1939085 | 40640175 ~ 40685641 (-) |
| LOC118940987 | NA | other | upstream | 1005885 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 2195642 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2422559 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | upstream | 2440013 | 45065134 ~ 45073340 (-) |
