G1550508


Basic Information

Item Value
gene id G1550508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42640243 ~ 42723707 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1774123
gctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagacttgtcttccaacaagacaatgatccaaaacaaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatatgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1774123 True 602 lncRNA 0.43 2 42640243 42723707

Neighbor

gene id symbol gene type direction distance location
LOC110496310 LOC106588521 coding downstream 15737 42618074 ~ 42624506 (-)
LOC110496309 thap7 coding downstream 51325 42555724 ~ 42588918 (-)
LOC110496307 LOC106588314 coding downstream 97278 42539327 ~ 42542965 (-)
stom stom coding downstream 188466 42440345 ~ 42451777 (-)
LOC110496300 LOC106588320 coding downstream 342471 42291667 ~ 42297772 (-)
LOC110496315 NA coding upstream 64813 42788520 ~ 42804428 (-)
LOC110496317 LOC106588307 coding upstream 135164 42858871 ~ 42866233 (-)
LOC118936491 LOC106588302 coding upstream 238269 42895031 ~ 43015119 (-)
LOC110496326 NA coding upstream 271744 42995451 ~ 43005501 (-)
LOC110496330 LOC106588299 coding upstream 505224 43228931 ~ 43258006 (-)
G1550423 NA non-coding downstream 14216 42625795 ~ 42626027 (-)
G1550421 NA non-coding downstream 15122 42624726 ~ 42625121 (-)
G1550417 LOC106588274 non-coding downstream 25659 42613695 ~ 42614584 (-)
G1550289 NA non-coding downstream 131390 42508595 ~ 42508853 (-)
G1550583 NA non-coding upstream 36291 42759998 ~ 42760468 (-)
G1550587 NA non-coding upstream 46543 42770250 ~ 42775103 (-)
G1550595 NA non-coding upstream 57289 42780996 ~ 42781356 (-)
G1550596 NA non-coding upstream 57768 42781475 ~ 42781750 (-)
G1550202 NA other downstream 280615 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 324164 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 968729 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 1731618 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1954602 40640175 ~ 40685641 (-)
LOC118940987 NA other upstream 907299 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 2097056 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 2323973 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 2341427 45065134 ~ 45073340 (-)

Expression


Co-expression Network