Gene
RNA
| Item | Value |
|---|---|
| gene id | G1550790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 42896091 ~ 42963338 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1774498 | True | 225 | lncRNA | 0.29 | 2 | 42896091 | 42963338 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496317 | LOC106588307 | coding | downstream | 29858 | 42858871 ~ 42866233 (-) |
| LOC110496315 | NA | coding | downstream | 91663 | 42788520 ~ 42804428 (-) |
| LOC110496310 | LOC106588521 | coding | downstream | 271585 | 42618074 ~ 42624506 (-) |
| LOC110496309 | thap7 | coding | downstream | 307173 | 42555724 ~ 42588918 (-) |
| LOC110496307 | LOC106588314 | coding | downstream | 353126 | 42539327 ~ 42542965 (-) |
| LOC110496326 | NA | coding | upstream | 32113 | 42995451 ~ 43005501 (-) |
| LOC110496330 | LOC106588299 | coding | upstream | 265593 | 43228931 ~ 43258006 (-) |
| LOC110496334 | NA | coding | upstream | 520083 | 43483421 ~ 43517409 (-) |
| LOC110496332 | LOC106588296 | coding | upstream | 555084 | 43518422 ~ 43539103 (-) |
| LOC110496335 | LOC106588256 | coding | upstream | 590697 | 43554035 ~ 43560458 (-) |
| G1550769 | NA | non-coding | downstream | 40142 | 42855711 ~ 42855949 (-) |
| G1550738 | NA | non-coding | downstream | 81757 | 42814132 ~ 42814334 (-) |
| G1550596 | NA | non-coding | downstream | 114341 | 42781475 ~ 42781750 (-) |
| G1550595 | NA | non-coding | downstream | 114735 | 42780996 ~ 42781356 (-) |
| G1550861 | NA | non-coding | upstream | 122446 | 43085784 ~ 43086352 (-) |
| G1550866 | NA | non-coding | upstream | 129755 | 43093093 ~ 43093295 (-) |
| G1551071 | NA | non-coding | upstream | 156984 | 43120322 ~ 43120941 (-) |
| G1551087 | LOC106562846 | non-coding | upstream | 182424 | 43145762 ~ 43146344 (-) |
| G1551599 | NA | non-coding | upstream | 634101 | 43597439 ~ 43598917 (-) |
| G1550202 | NA | other | downstream | 536463 | 42359148 ~ 42359628 (-) |
| G1550177 | LOC106569881 | other | downstream | 580012 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 1224577 | 41663436 ~ 41671516 (-) |
| LOC118941164 | LOC106588367 | other | downstream | 1987466 | 40902519 ~ 40908744 (-) |
| G1548517 | NA | other | downstream | 2210450 | 40640175 ~ 40685641 (-) |
| LOC118940987 | NA | other | upstream | 667668 | 43624763 ~ 43668196 (-) |
| G1552768 | LOC106588550 | other | upstream | 1857425 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 2084342 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | upstream | 2101796 | 45065134 ~ 45073340 (-) |
| G1553544 | NA | other | upstream | 2704023 | 45667361 ~ 45667740 (-) |
