G1550861


Basic Information

Item Value
gene id G1550861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43085784 ~ 43086352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1774571
GTTACAGGcgaccttcctaactcagttgcaggacatgaaggaaaccactcagggatttcaccttgTTACATGGCTGGgataggagaaaactaaggatggatcaacagcattgttgttactccacaatattaacctaaatgacagtgggGGGGGGaaaaggaagtctgtacagaatacaaatattccaaaacatgcatccaaaACAATACATAGCATAGCGTTCGGAGCGAATCCAACACgaaacatcactgagtaccactcttcatattttcaagcacgaTGGTGGCTGAATCATGTTATCGGTATTCTTGtaatcggcaaggactagggagttttttttaggatacAAATAAAAGGAATAGAGCAaagcacaggcaaagtcctagaggaaaacctggttcattctgctttccaacagacactgggagacaaatccaCTTTTCAGCAGGGTAATAGCTGAAacgcaaggccaaatatacactgaagtTCGTGTAGATGAAGGcaaggagacatgttaaagaaggataTTTAACATGGGCcagccagcatctctgtggaacacttgacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1774571 True 569 lncRNA 0.43 1 43085784 43086352

Neighbor

gene id symbol gene type direction distance location
LOC110496326 NA coding downstream 80283 42995451 ~ 43005501 (-)
LOC118936491 LOC106588302 coding downstream 119768 42895031 ~ 43015119 (-)
LOC110496317 LOC106588307 coding downstream 219551 42858871 ~ 42866233 (-)
LOC110496315 NA coding downstream 281356 42788520 ~ 42804428 (-)
LOC110496310 LOC106588521 coding downstream 461278 42618074 ~ 42624506 (-)
LOC110496330 LOC106588299 coding upstream 142579 43228931 ~ 43258006 (-)
LOC110496334 NA coding upstream 397069 43483421 ~ 43517409 (-)
LOC110496332 LOC106588296 coding upstream 432070 43518422 ~ 43539103 (-)
LOC110496335 LOC106588256 coding upstream 467683 43554035 ~ 43560458 (-)
LOC118940978 NA coding upstream 475435 43561787 ~ 43566641 (-)
G1550790 NA non-coding downstream 122446 42896091 ~ 42963338 (-)
G1550800 NA non-coding downstream 131844 42943061 ~ 42953940 (-)
G1550793 NA non-coding downstream 147718 42905428 ~ 42938066 (-)
G1550750 LOC106588302 non-coding downstream 152754 42899904 ~ 42933030 (-)
G1550769 NA non-coding downstream 229835 42855711 ~ 42855949 (-)
G1550866 NA non-coding upstream 6741 43093093 ~ 43093295 (-)
G1551071 NA non-coding upstream 33970 43120322 ~ 43120941 (-)
G1551087 LOC106562846 non-coding upstream 59410 43145762 ~ 43146344 (-)
G1551599 NA non-coding upstream 511087 43597439 ~ 43598917 (-)
LOC118940987 NA non-coding upstream 543929 43624763 ~ 43668196 (-)
G1550202 NA other downstream 726156 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 769705 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1414270 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2177159 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1734411 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1961328 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1978782 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2581009 45667361 ~ 45667740 (-)

Expression


Co-expression Network