G1551599



Basic Information


Item Value
gene id G1551599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43597439 ~ 43598917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1775360
TGCATTACCTATTGCAACCACGACTGCAGCTTCTTCCACAACCACTACTGAGGCACTTATTGCAACCACAATTGaagcttcttctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactatagcacctacgacaacatcccatttgacaactgcagctcctacaacaacaactgaagctgcttccacaagcactacttcagcccctactgcaaccacagctgaagcttcttctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaAACGActacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCCATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAACATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAAC

Function


NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1775360 True 777 lncRNA 0.47 2 43597439 43598917

Neighbor


gene id symbol gene type direction distance location
LOC118941171 NA coding downstream 737 43595536 ~ 43596702 (-)
LOC118940982 NA coding downstream 2261 43584935 ~ 43595178 (-)
LOC118940981 NA coding downstream 12518 43577657 ~ 43584921 (-)
LOC118940980 NA coding downstream 20536 43571589 ~ 43576903 (-)
LOC118940979 NA coding downstream 25881 43567310 ~ 43571558 (-)
LOC118940984 NA coding upstream 5407 43604324 ~ 43607758 (-)
LOC118940985 NA coding upstream 9288 43608205 ~ 43610335 (-)
LOC118940986 NA coding upstream 15757 43614674 ~ 43622823 (-)
LOC118940987 NA coding upstream 25846 43624763 ~ 43668196 (-)
LOC110496830 NA coding upstream 162768 43761685 ~ 43762658 (-)
G1551087 LOC106562846 non-coding downstream 451095 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 476498 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 504144 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 511087 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 643499 42943061 ~ 42953940 (-)
G1551623 NA non-coding upstream 75723 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 312116 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 387612 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 387908 43986825 ~ 43987035 (-)
LOC118936491 LOC106588302 other downstream 582320 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1237811 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1281360 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1925925 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2688814 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1221846 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1448763 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1466217 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2068444 45667361 ~ 45667740 (-)

Expression



Co-expression Network