G1551623


Basic Information

Item Value
gene id G1551623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43674640 ~ 43706492 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1775385
tcaagtaatagactcaagtaatctcaacatcaactgttcagaggagactgcatgaatcaggccacCATGGTCGAAAtgcctgcaaagaaaccactactaaaagacacaaATTAGAATAAGAGACTagGGGAATATTTTCTCTGTGAGAGGTACAATTACACTGTTTTACAACATTAATGCCTAAGTGTTGTTATCTCGGggtattaaacaaatcaatggGAACCAGTGTTAAAAAATAGATTAATGAatcaaataattgttttatttatttttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacacatacaacaacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaggccatggtggcaaagtagatacaatatagcaagtaaaacactggaatggtagatttgcaatgggagaatgtgcaaagtagaaataaaaataatgggggtgcaaaggagcaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1775385 True 597 lncRNA 0.36 2 43674640 43706492

Neighbor

gene id symbol gene type direction distance location
LOC118940987 NA coding downstream 6444 43624763 ~ 43668196 (-)
LOC118940986 NA coding downstream 51817 43614674 ~ 43622823 (-)
LOC118940985 NA coding downstream 64305 43608205 ~ 43610335 (-)
LOC118940984 NA coding downstream 66882 43604324 ~ 43607758 (-)
LOC118940983 NA coding downstream 71155 43598540 ~ 43603485 (-)
LOC110496830 NA coding upstream 55193 43761685 ~ 43762658 (-)
LOC118940988 NA coding upstream 58631 43765123 ~ 43769387 (-)
LOC118940989 NA coding upstream 65834 43772326 ~ 43780922 (-)
LOC118940990 NA coding upstream 74781 43781273 ~ 43789565 (-)
LOC118940991 NA coding upstream 84783 43791275 ~ 43794053 (-)
G1551599 NA non-coding downstream 75723 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 528296 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 553699 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 581345 43093093 ~ 43093295 (-)
G1551725 NA non-coding upstream 204541 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 280037 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 280333 43986825 ~ 43987035 (-)
LOC110496339 mterf1 non-coding upstream 306115 44010012 ~ 44012891 (-)
G1551935 NA non-coding upstream 343873 44050365 ~ 44050741 (-)
LOC118936491 LOC106588302 other downstream 659521 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1315012 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1358561 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2003126 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 1114271 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1341188 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1358642 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1960869 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 2081607 45788099 ~ 45803048 (-)

Expression


Co-expression Network