G1551725



Basic Information


Item Value
gene id G1551725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43911033 ~ 43911239 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1775496
GGGTAACCAGGCAATAGCTTACGATGCTACAAGGTCTAGGATATCAGAGACTGTCATCTCAGGTTTtgttgaatgtgaaatgtcatattaCCACAATGATATTATTTCCCTGCACTGTCTCTGTGAATAGGTTGAGCAAAATATGAGCCTTACACGCTATTGCTGTCACACCCTAAAAAACTacagtctaaaaaaaaaaaaaaaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1775496 True 207 lncRNA 0.37 1 43911033 43911239

Neighbor


gene id symbol gene type direction distance location
LOC118940993 NA coding downstream 20470 43860363 ~ 43890563 (-)
LOC118940992 NA coding downstream 52228 43813949 ~ 43858805 (-)
LOC118940991 NA coding downstream 116980 43791275 ~ 43794053 (-)
LOC118940990 NA coding downstream 121468 43781273 ~ 43789565 (-)
LOC118940989 NA coding downstream 130111 43772326 ~ 43780922 (-)
LOC118941172 NA coding upstream 10877 43922116 ~ 43926474 (-)
dus3l dus3l coding upstream 41079 43952318 ~ 43973541 (-)
LOC110496339 mterf1 coding upstream 98773 44010012 ~ 44012891 (-)
LOC110496341 LOC106588568 coding upstream 247604 44158843 ~ 44165139 (-)
LOC110496342 krit1 coding upstream 258730 44169969 ~ 44183141 (-)
G1551623 NA non-coding downstream 204541 43674640 ~ 43706492 (-)
LOC118940987 NA non-coding downstream 280150 43624763 ~ 43668196 (-)
G1551599 NA non-coding downstream 312116 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 764689 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 790092 43120322 ~ 43120941 (-)
G1551892 NA non-coding upstream 75290 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 75586 43986825 ~ 43987035 (-)
G1551935 NA non-coding upstream 139126 44050365 ~ 44050741 (-)
G1551962 NA non-coding upstream 176454 44087693 ~ 44093465 (-)
LOC118936491 LOC106588302 other downstream 895914 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1551405 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1594954 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2239519 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 909524 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1136441 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1153895 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1756122 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1876860 45788099 ~ 45803048 (-)

Expression



Co-expression Network