G1552331



Basic Information


Item Value
gene id G1552331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44384238 ~ 44384491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1776156
ACTCAGTGCTCTTCCATCTTACAGTCTACTAGTGAATTGCATAGTGCTGGGAAGCAGAGCTGTACAGCATCATTCTTTTTCTATAAGTCACCTTTCTTTGGGTGATCGATAAAAATAATACTGCGTTCGTGAGACAGAAACATTCGCTGTGTTACCTTAAAGTCCCCTTGGAAAGATCTCAAACAATGTAAAGAATAACTTCCAGGTAATATATCTGCTCTACTGCATAATTCTGTCAAATATGTTTTCCATTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1776156 True 254 lncRNA 0.38 1 44384238 44384491

Neighbor


gene id symbol gene type direction distance location
LOC118936320 LOC106588563 coding downstream 20290 44353210 ~ 44363948 (-)
LOC110496346 NA coding downstream 79762 44298329 ~ 44304476 (-)
trnal-uaa-58 NA coding downstream 99895 44284261 ~ 44284343 (-)
trnal-uaa-57 NA coding downstream 100664 44283492 ~ 44283574 (-)
trnal-uaa-56 NA coding downstream 101428 44282728 ~ 44282810 (-)
LOC110496350 rpc7l coding upstream 92705 44477196 ~ 44486727 (-)
LOC110496351 LOC106588560 coding upstream 102778 44487269 ~ 44537143 (-)
LOC110496833 LOC106588558 coding upstream 246275 44630766 ~ 44654925 (-)
si:ch73-109i22.2 LOC106588553 coding upstream 309840 44684653 ~ 44703092 (-)
LOC110496357 NA coding upstream 434053 44818544 ~ 44856861 (-)
trnal-uaa-48 NA non-coding downstream 107588 44275605 ~ 44276650 (-)
trnal-uaa-28 NA non-coding downstream 120187 44258600 ~ 44264051 (-)
G1552255 NA non-coding downstream 150469 44233524 ~ 44233769 (-)
G1552243 NA non-coding downstream 151249 44229930 ~ 44232989 (-)
G1552245 NA non-coding downstream 172815 44211086 ~ 44211423 (-)
G1552348 NA non-coding upstream 26197 44410688 ~ 44411062 (-)
G1552353 NA non-coding upstream 36192 44420683 ~ 44420951 (-)
G1552358 NA non-coding upstream 43467 44427958 ~ 44428171 (-)
G1552360 NA non-coding upstream 49989 44434480 ~ 44434739 (-)
G1552372 NA non-coding upstream 73531 44458022 ~ 44458377 (-)
LOC118940987 NA other downstream 751361 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 1369119 42895031 ~ 43015119 (-)
G1550202 NA other downstream 2024610 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 2068159 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2712724 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 436272 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 663189 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 680643 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1282870 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1403608 45788099 ~ 45803048 (-)

Expression



Co-expression Network