Gene
RNA
| Item | Value |
|---|---|
| gene id | G1552348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 44410688 ~ 44411062 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| thrombospondin-3b-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1776173 | True | 317 | lncRNA | 0.51 | 2 | 44410688 | 44411062 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936320 | LOC106588563 | coding | downstream | 46740 | 44353210 ~ 44363948 (-) |
| LOC110496346 | NA | coding | downstream | 106212 | 44298329 ~ 44304476 (-) |
| trnal-uaa-58 | NA | coding | downstream | 126345 | 44284261 ~ 44284343 (-) |
| trnal-uaa-57 | NA | coding | downstream | 127114 | 44283492 ~ 44283574 (-) |
| trnal-uaa-56 | NA | coding | downstream | 127878 | 44282728 ~ 44282810 (-) |
| LOC110496350 | rpc7l | coding | upstream | 66134 | 44477196 ~ 44486727 (-) |
| LOC110496351 | LOC106588560 | coding | upstream | 76207 | 44487269 ~ 44537143 (-) |
| LOC110496833 | LOC106588558 | coding | upstream | 219704 | 44630766 ~ 44654925 (-) |
| si:ch73-109i22.2 | LOC106588553 | coding | upstream | 283269 | 44684653 ~ 44703092 (-) |
| LOC110496357 | NA | coding | upstream | 407482 | 44818544 ~ 44856861 (-) |
| G1552331 | NA | non-coding | downstream | 26197 | 44384238 ~ 44384491 (-) |
| trnal-uaa-48 | NA | non-coding | downstream | 134038 | 44275605 ~ 44276650 (-) |
| trnal-uaa-28 | NA | non-coding | downstream | 146637 | 44258600 ~ 44264051 (-) |
| G1552255 | NA | non-coding | downstream | 176919 | 44233524 ~ 44233769 (-) |
| G1552243 | NA | non-coding | downstream | 177699 | 44229930 ~ 44232989 (-) |
| G1552353 | NA | non-coding | upstream | 9621 | 44420683 ~ 44420951 (-) |
| G1552358 | NA | non-coding | upstream | 16896 | 44427958 ~ 44428171 (-) |
| G1552360 | NA | non-coding | upstream | 23418 | 44434480 ~ 44434739 (-) |
| G1552372 | NA | non-coding | upstream | 46960 | 44458022 ~ 44458377 (-) |
| G1552387 | NA | non-coding | upstream | 84491 | 44495553 ~ 44495793 (-) |
| LOC118940987 | NA | other | downstream | 777811 | 43624763 ~ 43668196 (-) |
| LOC118936491 | LOC106588302 | other | downstream | 1395569 | 42895031 ~ 43015119 (-) |
| G1550202 | NA | other | downstream | 2051060 | 42359148 ~ 42359628 (-) |
| G1550177 | LOC106569881 | other | downstream | 2094609 | 42315286 ~ 42316079 (-) |
| LOC110496277 | LOC106588347 | other | downstream | 2739174 | 41663436 ~ 41671516 (-) |
| G1552768 | LOC106588550 | other | upstream | 409701 | 44820763 ~ 44828808 (-) |
| G1552866 | LOC106588536 | other | upstream | 636618 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | upstream | 654072 | 45065134 ~ 45073340 (-) |
| G1553544 | NA | other | upstream | 1256299 | 45667361 ~ 45667740 (-) |
| G1553693 | LOC106588587 | other | upstream | 1377037 | 45788099 ~ 45803048 (-) |
