Gene
RNA
| Item | Value |
|---|---|
| gene id | G1552760 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 44867449 ~ 44868046 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tropomyosin alpha-3 chain isoform X8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1776608 | True | 348 | lncRNA | 0.43 | 2 | 44867449 | 44868046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496357 | NA | coding | downstream | 10715 | 44818544 ~ 44856861 (-) |
| si:ch73-109i22.2 | LOC106588553 | coding | downstream | 164357 | 44684653 ~ 44703092 (-) |
| LOC110496833 | LOC106588558 | coding | downstream | 212524 | 44630766 ~ 44654925 (-) |
| LOC110496351 | LOC106588560 | coding | downstream | 330306 | 44487269 ~ 44537143 (-) |
| LOC110496350 | rpc7l | coding | downstream | 380722 | 44477196 ~ 44486727 (-) |
| LOC110496937 | LOC106588536 | coding | upstream | 70084 | 44938130 ~ 44943098 (-) |
| LOC110496360 | LOC106588576 | coding | upstream | 473957 | 45342003 ~ 45347556 (-) |
| LOC100499581 | LOC106588577 | coding | upstream | 501523 | 45369569 ~ 45372973 (-) |
| LOC110496365 | LOC106588581 | coding | upstream | 607889 | 45475935 ~ 45562167 (-) |
| LOC110496374 | LOC106570224 | coding | upstream | 988687 | 45856733 ~ 45890268 (-) |
| G1552703 | NA | non-coding | downstream | 150845 | 44708042 ~ 44716604 (-) |
| G1552702 | NA | non-coding | downstream | 159519 | 44707166 ~ 44707930 (-) |
| G1552696 | NA | non-coding | downstream | 191339 | 44675802 ~ 44676110 (-) |
| G1552759 | NA | non-coding | upstream | 22624 | 44890670 ~ 44892103 (-) |
| G1552794 | NA | non-coding | upstream | 26292 | 44894338 ~ 44895008 (-) |
| G1552801 | NA | non-coding | upstream | 37692 | 44905738 ~ 44906050 (-) |
| G1552810 | NA | non-coding | upstream | 44511 | 44912557 ~ 44912813 (-) |
| G1552868 | NA | non-coding | upstream | 92913 | 44960959 ~ 44999030 (-) |
| G1552768 | LOC106588550 | other | downstream | 38641 | 44820763 ~ 44828808 (-) |
| LOC118940987 | NA | other | downstream | 1234572 | 43624763 ~ 43668196 (-) |
| LOC118936491 | LOC106588302 | other | downstream | 1852330 | 42895031 ~ 43015119 (-) |
| G1550202 | NA | other | downstream | 2507821 | 42359148 ~ 42359628 (-) |
| G1550177 | LOC106569881 | other | downstream | 2551370 | 42315286 ~ 42316079 (-) |
| G1552866 | LOC106588536 | other | upstream | 179634 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | upstream | 197088 | 45065134 ~ 45073340 (-) |
| G1553544 | NA | other | upstream | 799315 | 45667361 ~ 45667740 (-) |
| G1553693 | LOC106588587 | other | upstream | 920053 | 45788099 ~ 45803048 (-) |
| G1554091 | NA | other | upstream | 1233202 | 46101248 ~ 46108102 (-) |
