G1552801



Basic Information


Item Value
gene id G1552801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44905738 ~ 44906050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1776649
tatacagtatatcacaaaactgagtacacccctcacatttttgtaaatatttgagtatatcttttcatgtgacaacactgaagaaatgacactttgctacaatgtaaagtagtgagtgtacagcttgtttaacagtgtacatttgctgtcccctcaaaataactcaacacacagccattaatgtctaaaccgctggcaacaaaagtgagtacacccctaagtgaaaatgtccaaattgggcccaattagccattttccctccccggtgtcatgtgactcattcgtgttacaaggtctcaggtgtgaatgggga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1776649 True 313 lncRNA 0.40 1 44905738 44906050

Neighbor


gene id symbol gene type direction distance location
LOC110496357 NA coding downstream 49004 44818544 ~ 44856861 (-)
si:ch73-109i22.2 LOC106588553 coding downstream 202646 44684653 ~ 44703092 (-)
LOC110496833 LOC106588558 coding downstream 250813 44630766 ~ 44654925 (-)
LOC110496351 LOC106588560 coding downstream 368595 44487269 ~ 44537143 (-)
LOC110496350 rpc7l coding downstream 419011 44477196 ~ 44486727 (-)
LOC110496937 LOC106588536 coding upstream 32080 44938130 ~ 44943098 (-)
LOC110496360 LOC106588576 coding upstream 435953 45342003 ~ 45347556 (-)
LOC100499581 LOC106588577 coding upstream 463519 45369569 ~ 45372973 (-)
LOC110496365 LOC106588581 coding upstream 569885 45475935 ~ 45562167 (-)
LOC110496374 LOC106570224 coding upstream 950683 45856733 ~ 45890268 (-)
G1552794 NA non-coding downstream 10730 44894338 ~ 44895008 (-)
G1552759 NA non-coding downstream 13635 44890670 ~ 44892103 (-)
G1552760 NA non-coding downstream 37692 44867449 ~ 44868046 (-)
G1552703 NA non-coding downstream 189134 44708042 ~ 44716604 (-)
G1552810 NA non-coding upstream 6507 44912557 ~ 44912813 (-)
G1552868 NA non-coding upstream 54909 44960959 ~ 44999030 (-)
G1552866 LOC106588536 non-coding upstream 141630 45047680 ~ 45087786 (-)
G1552876 NA non-coding upstream 169794 45075844 ~ 45082410 (-)
G1552891 NA non-coding upstream 204943 45110993 ~ 45111199 (-)
G1552768 LOC106588550 other downstream 76930 44820763 ~ 44828808 (-)
LOC118940987 NA other downstream 1272861 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 1890619 42895031 ~ 43015119 (-)
G1550202 NA other downstream 2546110 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 2589659 42315286 ~ 42316079 (-)
G1552875 LOC106588536 other upstream 159084 45065134 ~ 45073340 (-)
G1553544 NA other upstream 761311 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 882049 45788099 ~ 45803048 (-)
G1554091 NA other upstream 1195198 46101248 ~ 46108102 (-)

Expression



Co-expression Network