G1553083



Basic Information


Item Value
gene id G1553083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 45164449 ~ 45164933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1776984
TTGTGGGTGATGAGGCAACCAGAGGAAGGGAGATGGTAAGAGCTGTTAAATATCTGGCTATCTTACCTTGCGAAGAGACATAGGACATGGTCTAAAGACATCCAGAGTCACCCAGAGCAAGCTCTCAGCACTTTCAATCTCGTCTGTAGAAATGCCATTAATAAAACGGCTACATAATGATTGGTCAAAGCCTAGGAACCGTTAACTGAGAAAATACAACGGCAATGCATAAAAATGACTCAGTCCATCTCCGTTGGAGGCCATTTCCGACGATAGAGTAAAGgacataaatataaatacatgtaaatTGTTGTCTACATAGAAATATGGGTATATCACACGAACCGAAgtgagtgggagagggaggcaaGAAGAGGTGGAGCGTTTGAGCGCTTGCGTGTGCAATGTATTAGGCTACCAAGTGCACGTATAGGCTACCTTAATCGTTGTCTGCCAAATTATCATAAGGTCAAAGTCTATGCCCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1776984 True 485 lncRNA 0.43 1 45164449 45164933

Neighbor


gene id symbol gene type direction distance location
LOC110496937 LOC106588536 coding downstream 221351 44938130 ~ 44943098 (-)
LOC110496357 NA coding downstream 307715 44818544 ~ 44856861 (-)
si:ch73-109i22.2 LOC106588553 coding downstream 461357 44684653 ~ 44703092 (-)
LOC110496833 LOC106588558 coding downstream 509524 44630766 ~ 44654925 (-)
LOC110496351 LOC106588560 coding downstream 627306 44487269 ~ 44537143 (-)
LOC110496360 LOC106588576 coding upstream 177070 45342003 ~ 45347556 (-)
LOC100499581 LOC106588577 coding upstream 204636 45369569 ~ 45372973 (-)
LOC110496365 LOC106588581 coding upstream 311002 45475935 ~ 45562167 (-)
LOC110496374 LOC106570224 coding upstream 691800 45856733 ~ 45890268 (-)
LOC110496375 LOC106588593 coding upstream 746923 45911856 ~ 46028798 (-)
G1552947 NA non-coding downstream 10739 45153412 ~ 45153710 (-)
G1552946 NA non-coding downstream 11204 45153009 ~ 45153245 (-)
G1552928 NA non-coding downstream 24212 45139996 ~ 45140237 (-)
G1552915 NA non-coding downstream 40377 45123840 ~ 45124072 (-)
G1552912 NA non-coding downstream 43075 45121032 ~ 45121374 (-)
G1553094 NA non-coding upstream 17950 45182883 ~ 45191541 (-)
G1553097 NA non-coding upstream 22141 45187074 ~ 45264919 (-)
G1553326 NA non-coding upstream 234761 45399694 ~ 45403664 (-)
G1553378 NA non-coding upstream 293122 45458055 ~ 45458425 (-)
G1553380 NA non-coding upstream 295125 45460058 ~ 45460346 (-)
G1552866 LOC106588536 other downstream 76663 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other downstream 91109 45065134 ~ 45073340 (-)
G1552768 LOC106588550 other downstream 335641 44820763 ~ 44828808 (-)
LOC118940987 NA other downstream 1531572 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 2149330 42895031 ~ 43015119 (-)
G1553544 NA other upstream 502428 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 623166 45788099 ~ 45803048 (-)
G1554091 NA other upstream 936315 46101248 ~ 46108102 (-)
G1555168 NA other upstream 1747044 46911977 ~ 46912915 (-)
G1555543 NA other upstream 2378627 47543208 ~ 47546614 (-)

Expression



Co-expression Network