Gene
RNA
| Item | Value |
|---|---|
| gene id | G1553532 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 45659662 ~ 45659974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1777477 | True | 313 | lncRNA | 0.46 | 1 | 45659662 | 45659974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496365 | LOC106588581 | coding | downstream | 97495 | 45475935 ~ 45562167 (-) |
| LOC100499581 | LOC106588577 | coding | downstream | 286689 | 45369569 ~ 45372973 (-) |
| LOC110496360 | LOC106588576 | coding | downstream | 312106 | 45342003 ~ 45347556 (-) |
| LOC110496937 | LOC106588536 | coding | downstream | 716564 | 44938130 ~ 44943098 (-) |
| LOC110496357 | NA | coding | downstream | 802928 | 44818544 ~ 44856861 (-) |
| LOC110496374 | LOC106570224 | coding | upstream | 196759 | 45856733 ~ 45890268 (-) |
| LOC110496375 | LOC106588593 | coding | upstream | 251882 | 45911856 ~ 46028798 (-) |
| LOC110496377 | LOC106588592 | coding | upstream | 379677 | 46039651 ~ 46056951 (-) |
| LOC110496378 | LOC106588595 | coding | upstream | 401070 | 46061044 ~ 46074477 (-) |
| LOC110496379 | LOC106588596 | coding | upstream | 420523 | 46080497 ~ 46142731 (-) |
| G1553523 | NA | non-coding | downstream | 8180 | 45651240 ~ 45651482 (-) |
| G1553503 | NA | non-coding | downstream | 29655 | 45629766 ~ 45630007 (-) |
| G1553473 | NA | non-coding | downstream | 65608 | 45593786 ~ 45594054 (-) |
| G1553380 | NA | non-coding | downstream | 199316 | 45460058 ~ 45460346 (-) |
| G1553701 | NA | non-coding | upstream | 140977 | 45800951 ~ 45802614 (-) |
| G1553721 | NA | non-coding | upstream | 173737 | 45833711 ~ 45833951 (-) |
| G1553988 | NA | non-coding | upstream | 190010 | 45849984 ~ 45850330 (-) |
| G1553990 | NA | non-coding | upstream | 191453 | 45851427 ~ 45851740 (-) |
| G1554026 | NA | non-coding | upstream | 243359 | 45903333 ~ 45903538 (-) |
| G1552866 | LOC106588536 | other | downstream | 571876 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | downstream | 586322 | 45065134 ~ 45073340 (-) |
| G1552768 | LOC106588550 | other | downstream | 830854 | 44820763 ~ 44828808 (-) |
| LOC118940987 | NA | other | downstream | 2026785 | 43624763 ~ 43668196 (-) |
| LOC118936491 | LOC106588302 | other | downstream | 2644543 | 42895031 ~ 43015119 (-) |
| G1553544 | NA | other | upstream | 7387 | 45667361 ~ 45667740 (-) |
| G1553693 | LOC106588587 | other | upstream | 128125 | 45788099 ~ 45803048 (-) |
| G1554091 | NA | other | upstream | 441274 | 46101248 ~ 46108102 (-) |
| G1555168 | NA | other | upstream | 1252003 | 46911977 ~ 46912915 (-) |
| G1555543 | NA | other | upstream | 1883586 | 47543208 ~ 47546614 (-) |
