G1553693 (LOC106588587)


Basic Information

Item Value
gene id G1553693
gene name LOC106588587
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 45788099 ~ 45803048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1777651
GTTTTTATTCTGCACAATTCTGCCACAATGCATCAGCAGGCTCAAACCTTCaagactaaatacattttttgctTCTCAAGGACTGAAAACATAGAAAACCCAAcaggtatacagtacatacacctaACAATCAATTGCAAATGAGACAGGAAGTAGtagaaacaaagacaaaaaaagaACAAACTCATAGCACACTAGTCAAACTTCTTCCAAGGAGGGCCAAGTGTATGCAGGTTTTCGCTCCACCTTGTACTCGACTGATGAATTAaagtcactaattagtaaggagcccccctcacctggttgtctaggccCTAAttgaaaattaaaaaaaacagcagACTCTAGTCTAAGCCCTCCATGGAGTGAGTTTGACATCCTTGCCATAGATTAATTAACATGTGAAAATGGTAAAAACACCAGGTGAGGTATTCTGTTATCCAAAAATATTAACATTCAACAAAGTGAGTGGACAAAACAGCAAATTAACAAGGGTGAGGAAAGCAAAGTTGAAAGTGATGGAGGCTATGGAAAAATGCAGTATCTGAGCGTACTCATTACGATCCATTACGTAGTTTCAATAAAGGGAAAGAATAGCACAGCTGTTGATACACATTCTGAAAAGAAAAAGCTAGACAGAATCTTACAGTTATGATTATACTCAGTCTCATCTGGTCAATGGACTCATAAACACATAATAGATTTGAGTTTCTATTGAGAACGGTGGCCAGTAACTATCATACAAAATGACATCACTAACAGAAAAAAGGTATTCTGATAAACATTTACACATACTGTCCATTAAGTTTTGAACAGGAGAGTTAATAGTTTAGTTGCTTAAAAAGTCAGTAATCAATTATCCCAGTTTGTATAGTATGAGTATTCCATAATACAGGTGTACTTTATAGCTTTAACAGTTAAGACCGTATTTCAAAACAAGCAGCAAGTAaaatatccttcaaactgaatcATGGTCAATGGGCTGAAAAACATCTCTAAACGATGCCCCCTAGAAATAAAATGGTGGATTTAACCATGTGTTGGTTGTATGTAACACAGCTCTCGGAACCAACCCCTGAAAACGGAGTGTCACTCAGAATCAATACCCTTCGTTGAACTAATAAATTCCTggctttatatatatttttttacacttaTACAGAGGTTTGTTCTAACATGTAGCCTGTGAGAATGTCAACATTTGAATTACAGTTCTACGAAAAGGAGAATAATAAGTAAACACCTCAAATTAAGTTGACATTTAATCTTGACAACACTAGCAGGCAGCTCAACATCAATATAAAAGTATACATTTCAGGGCACTGCAATCTGCTGCAGTCAGCCAGGTAAAGGGATCTATATACACTGTACATGTACTCTGAAGTGACAACTCAGACAGCCACCGGCTCTGGTTCTAAAGGATCCATCTCTGGAACATCCTGATGTGGTTCTAAAGGATCTTCTTCTGGAAGAGACATTTCTGGTTCTGCTGGTTCCACATCTGGGATGATGAGGTCGTGCTTAAGTTTCTTCAGCTCAGTCATGTTGAAGCCCATGAAGATGGTAGGGCTGTTCCTCTGGATCGCCTTCATGCACTTGGTGCGCTTCATTCCAAACAGAGTGGACACCTCAGTCCGGGTCAGCCACAGTCTCTTGGAGAGCTCCTCAGACTCCTTCTTTGTGGGATACGGCTTGGTGTGAAAGTATCTTGTGAGGAAGTCTTTCCGCTCCTCAGAGGGGCGTTTCTCCATCCCACTGGGGTCCAGGGCTAGCTGAATAGAGGGGTCAGTCAGGGGTGCCTGCTCTCGTTTCTCCTTCTCTCGTTGCTTGCGGAAGGCTGCCCGCGCATCCCTCTCTTTCTTGTTGGCCTCCATGGCCTCCCTGAAGGCTGCCTCCAGCCTCAGCTTGCTCTGCAGCTCAGCAGGTGACTCGGAGGAGTGGGGGATGGGGACGGAGGGCTTCGCTGCCATGGGGACGGGAGGGAGCTGGGTAGAGTACCGACCTGGCACCTGGATCATCTGGTTAAAGGCCATGACCTGCTGCTGGCGTCCGTTGGTGGGGGTGGACTGGAGACTGTCTGCATCTGTAGGGGTCTTGGGTGCACGGCGGCACCGCTGTAGATGGATGATTATAGCTTTCTGCGTGGTCTTGCCTGTGTAAACGCCGTTGCAGTAGATGCATTTGAATGCTGAGGTCTTGAGGATGGCATGGACAGTGGGCGCAATGCAGTGCTTCCCACTCAGATGGGCCCGGTAGTTCTCCAGTGTGACACACTTCTCTTCACAGAAGGGGCAGTCGGTCTGCATCGTTTTACTGGGGTTCCGACACACTTCCTGTTTACCACCAGGTTGCATCTTGAGGAAGATCAGGTCCAGGGAGTTCGTGACCAGAGCTAATTTCAGTTCTGCGTCTCCTAGGATTTCTTTGGGGGCCGTGGTGTTAATGTCAAAGTAGGGGAACAGAAGGTTACCGCTGTCGTCTGTGTACAGTCTATACTCCCGCCTCATGAAGTCACAGTTGGCCTTCTGTGtggggttgtgttgtgtgtttgtgtgttcaacCAGTTGTTGGATGGAGTAGAACATCccaggacagtagagacagttgaGCCCGTGCAGCAGGTGTTCAAAGAGGCCCTTCTCAGACAGGAGGATCTTACACTTCAAACACTTGACTGTCTTGTCAGGCATCTTCCTGAGGAAGGGAGCACGGGCAGCCAGGCCCTGCTGCTTGGCTGTTCTGGGCTGGGCCTTGTGGGCAGCCTGCTGGTGAGCCTCATAGACATTGGAGGGGAGCAGTTCATTACAGATGGGACAGGTGATCCACTTCTTGGCTTTGGCGTTGAGAGCGGGGTTACCTGCTGGTTTGATGGGTTGAGGAGCCTTGCTCATCAGCTGGACGTTGCTCGTCTGGCCGGGCATGCCCATTGGTGTTGCGAAGGTGTAGGTGGGCATGCCGTTGACCTTGTTGCCTGTGGGGATGAGGTGGCTGAGGAGGGACTGGGAGGTCAGCATGGTGCCCTGAGGGGTGCTCTGGAGAATGGTACTCTGGGGGGTCCCATGGTTCAGGGGGAGGCGCTGAGTCATCATGAGGGACTGGGACATCCCTGGAATGCTGATCTGCACCCTCGGGGGCAGGAAGACCTGCTGGGGCTGCTGCTGACCTTGGACCCCTATGAAAGGCACCTGGTTGTGAGGAGCACCAGGTAGCGAGGTGCCAGAGGGCAGTCTGACCATGGTCTGGCCGATGGGCATGGTGGCTGAGATGGCCCCCTGTGGCATAGCACTCTGCAGGTTGACAGTAGCACCAGGCTGGAGGAGGCCTTTAGCATTAGCACCGGCCATATGAACCAGGGTTGAAGACTGTGGGGGGAGGAAGCTCTGTTTGGCCCCGGCCAGCTGCTCAGGACTGGATACCTGTGGCAGCTGGTTTTTAGGGGCCAGTGTTTGGTAATTTGAAGGCTTGGTGTACTGAGTGTTCTCTAAGATCCAGGTCCTTATCTGAGCGCAGGCCCACTGGTGAGTGGGAGAGGACAGGATATGGTGCAGCATGTGCTCCGTGCTTTCGATGGCCATCTTACACACCTTACAGAACTgcctggaggctgtatgggggaactTAGTGTCTGGTATCCGTCCTGAGAAGTGGTGCCACAGCTTCTCCAGGTGGTTAAGCAGGACGTGCTTCTTCATTGAGAACAGGTTTGAGTCCACATATCGGCACTTACGACACTTAAACCGGTCCCCTTTCTTGGTAGTTGAATGCAGAGACTCTGCATCCTGGTCCATGTTCGGAGAgccatggaagaggaggaggtgcttCTTGAGGACTCGGGGGTGGGCGACAAAGGGGCAGATCTGGCAGGGAGCCAGGACACACAGTTTCCTCTCATACTCATGGTTCCGCTGCAGATGACTCTTGTAGGAGTACCAGTTCCGTGTAGAGTACTTACAGAGGGTGCAGCACAACAGCCGTGTGCGG
>TU1777652
TCTTAAGGAAGATCAGGTCCAGAGAGTTGGTAACCACAGCCAGTTTCAGCTCTGCGTCTCCTAGGATCTCTTTGGGGGCCGTGGTGTTAATGTCAAAGTTGGGGAACCGAAGGTTACCGCTGTCGTCTGTGTACAGTCTATACTCCCGCCTCATGAAGTCACAGTTGGCCTTCTGTGtggggttgtgttgtgtgtttgtgtgttcaacCAGTTGTTGGATGGAGTAGAACATCccaggacagtagagacagttgaGCCCGTGCAGCAGGTGTTCAAAGAGGCCCTTCTCAGACAGGAGGATCTTACACTTCAAACACTTGACTGTCTTGTCAGGCATCTTCCTGAGGAAGGGAGCACGGGCAGCCAGGCCCTGCTGCTTGGCTGTTCTGGGCTGGGCCTTGTGGGCAGCCTGCTGGTGAGCCTCATAGACATTGGAGGGGAGCAGTTCATTACAGATGGGACAGGTGATCCACTTCTTGGCTTTGGCGTTGAGAGCGGGGTTACCTGCTGGTTTGATGGGTTGAGGAGCCTTGCTCATCAGCTGGACGTTGCTCGTCTGGCCGGGCATGCCCATTGGTGTTGCGAAGGTGTAGGTGGGCATGCCGTTGACCTTGTTGCCTGTGGGGATGAGGTGGCTGAGGAGGGACTGGGAGGTCAGCATGGTGCCCTGAGGGGTGCTCTGGAGAATGGTACTCTGGGGGGTCCCATGGTTCAGGGGGAGGCGCTGAGTCATCATGAGGGACTGGGACATCCCTGGAATGCTGATCTGCACCCTCGGGGGCAGGAAGACCTGCTGGGGCTGCTGCTGACCTTGGACCCCTATGAAAGGCACCTGGTTGTGAGGAGCACCAGGTAGCGAGGTGCCAGAGGGCAGTCTGACCATGGTCTGGCCGATGGGCATGGTGGCTGAGATGGCCCCCTGTGGCATAGCACTCTGCAGGTTGACAGTAGCACCAGGCTGGAGGAGGCCTTTAGCATTAGCACCGGCCATATGAACCAGGGTTGAAGACTGTGGGGGGAGGAAGCTCTGTTTGGCCCCGGCCAGCTGCTCAGGACTGGATACCTGTGGCAGCTGGTTTTTAGGGGCCAGTGTTTGGTAATTTGAAGGCTTGGTGTACTGAGTGTTCTCTAAGATCCAGGTCCTTATCTGAGCGCAGGCCCACTGGTGAGTGGGAGAGGACAGGATATGGTGCAGCATGTGCTCCGTGCTTTCGATGGCCATCTTACACACCTTACAGAACTgcctggaggctgtatgggggaactTAGTGTCTGGTATCCGTCCTGAGAAGTGGTGCCACAGCTTCTCCAGGTGGTTAAGCAGGACGTGCTTCTTCATTGAGAACAGGTTTGAGTCCACATATCGGCACTTACGACACTTAAACCGGTCCCCTTTCTTGGTAGTTGAATGCAGAGACTCTGCATCCTGGTCCATGTTCGGAGAgccatggaagaggaggaggtgcttCTTGAGGACTCGGGGGTGGGCGACAAAGGGGCAGATCTGGCAGGGAGCCAGGACACACAGTTTCCTCTCATACTCATGGTTCCGCTGCAGATGACTCTTGTAGGAGTACCAGTTCCGTGTAGAGTACTTACAGAGGGTGCAGCACAACAGCCGTGTGCGG

Function

NR:

description
ADNP homeobox protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1777651 False 3981 TUCP 0.49 2 45788099 45792133
TU1777652 True 1628 TUCP 0.56 2 45788099 45803048

Neighbor

gene id symbol gene type direction distance location
LOC110496365 LOC106588581 coding downstream 225932 45475935 ~ 45562167 (-)
LOC100499581 LOC106588577 coding downstream 415126 45369569 ~ 45372973 (-)
LOC110496360 LOC106588576 coding downstream 440543 45342003 ~ 45347556 (-)
LOC110496937 LOC106588536 coding downstream 845001 44938130 ~ 44943098 (-)
LOC110496357 NA coding downstream 931365 44818544 ~ 44856861 (-)
LOC110496374 LOC106570224 coding upstream 53685 45856733 ~ 45890268 (-)
LOC110496375 LOC106588593 coding upstream 108808 45911856 ~ 46028798 (-)
LOC110496377 LOC106588592 coding upstream 236603 46039651 ~ 46056951 (-)
LOC110496378 LOC106588595 coding upstream 257996 46061044 ~ 46074477 (-)
LOC110496379 LOC106588596 coding upstream 277449 46080497 ~ 46142731 (-)
G1553532 NA non-coding downstream 128125 45659662 ~ 45659974 (-)
G1553523 NA non-coding downstream 136617 45651240 ~ 45651482 (-)
G1553503 NA non-coding downstream 158092 45629766 ~ 45630007 (-)
G1553473 NA non-coding downstream 194045 45593786 ~ 45594054 (-)
G1553721 NA non-coding upstream 30663 45833711 ~ 45833951 (-)
G1553988 NA non-coding upstream 46936 45849984 ~ 45850330 (-)
G1553990 NA non-coding upstream 48379 45851427 ~ 45851740 (-)
G1554026 NA non-coding upstream 100285 45903333 ~ 45903538 (-)
G1554041 NA non-coding upstream 118395 45921443 ~ 45921754 (-)
G1553544 NA other downstream 120359 45667361 ~ 45667740 (-)
G1552866 LOC106588536 other downstream 700313 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other downstream 714759 45065134 ~ 45073340 (-)
G1552768 LOC106588550 other downstream 959291 44820763 ~ 44828808 (-)
LOC118940987 NA other downstream 2155222 43624763 ~ 43668196 (-)
G1554091 NA other upstream 298200 46101248 ~ 46108102 (-)
G1555168 NA other upstream 1108929 46911977 ~ 46912915 (-)
G1555543 NA other upstream 1740512 47543208 ~ 47546614 (-)
LOC110496837 LOC106588626 other upstream 2101791 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 other upstream 2179835 47982726 ~ 47986560 (-)

Expression


Co-expression Network