Gene
RNA
| Item | Value |
|---|---|
| gene id | G1554026 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 45903333 ~ 45903538 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1778029 | True | 206 | lncRNA | 0.46 | 1 | 45903333 | 45903538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496374 | LOC106570224 | coding | downstream | 13065 | 45856733 ~ 45890268 (-) |
| LOC110496365 | LOC106588581 | coding | downstream | 341166 | 45475935 ~ 45562167 (-) |
| LOC100499581 | LOC106588577 | coding | downstream | 530360 | 45369569 ~ 45372973 (-) |
| LOC110496360 | LOC106588576 | coding | downstream | 555777 | 45342003 ~ 45347556 (-) |
| LOC110496937 | LOC106588536 | coding | downstream | 960235 | 44938130 ~ 44943098 (-) |
| LOC110496375 | LOC106588593 | coding | upstream | 8318 | 45911856 ~ 46028798 (-) |
| LOC110496377 | LOC106588592 | coding | upstream | 136113 | 46039651 ~ 46056951 (-) |
| LOC110496378 | LOC106588595 | coding | upstream | 157506 | 46061044 ~ 46074477 (-) |
| LOC110496379 | LOC106588596 | coding | upstream | 176959 | 46080497 ~ 46142731 (-) |
| LOC110496382 | LOC106588622 | coding | upstream | 673920 | 46577458 ~ 46640870 (-) |
| G1553990 | NA | non-coding | downstream | 51593 | 45851427 ~ 45851740 (-) |
| G1553988 | NA | non-coding | downstream | 53003 | 45849984 ~ 45850330 (-) |
| G1553721 | NA | non-coding | downstream | 69382 | 45833711 ~ 45833951 (-) |
| G1553701 | NA | non-coding | downstream | 100719 | 45800951 ~ 45802614 (-) |
| G1553532 | NA | non-coding | downstream | 243359 | 45659662 ~ 45659974 (-) |
| G1554041 | NA | non-coding | upstream | 17905 | 45921443 ~ 45921754 (-) |
| G1554172 | NA | non-coding | upstream | 314482 | 46218020 ~ 46218324 (-) |
| G1554213 | NA | non-coding | upstream | 320394 | 46223932 ~ 46286906 (-) |
| G1554248 | NA | non-coding | upstream | 383429 | 46286967 ~ 46288146 (-) |
| G1554252 | NA | non-coding | upstream | 389848 | 46293386 ~ 46293594 (-) |
| G1553693 | LOC106588587 | other | downstream | 100285 | 45788099 ~ 45803048 (-) |
| G1553544 | NA | other | downstream | 235593 | 45667361 ~ 45667740 (-) |
| G1552866 | LOC106588536 | other | downstream | 815547 | 45047680 ~ 45087786 (-) |
| G1552875 | LOC106588536 | other | downstream | 829993 | 45065134 ~ 45073340 (-) |
| G1552768 | LOC106588550 | other | downstream | 1074525 | 44820763 ~ 44828808 (-) |
| G1554091 | NA | other | upstream | 197710 | 46101248 ~ 46108102 (-) |
| G1555168 | NA | other | upstream | 1008439 | 46911977 ~ 46912915 (-) |
| G1555543 | NA | other | upstream | 1640022 | 47543208 ~ 47546614 (-) |
| LOC110496837 | LOC106588626 | other | upstream | 2001301 | 47890580 ~ 47945574 (-) |
| LOC110496401 | LOC106588640 | other | upstream | 2079345 | 47982726 ~ 47986560 (-) |
