Gene
RNA
| Item | Value |
|---|---|
| gene id | G1554790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 46725225 ~ 46725564 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1778874 | True | 300 | lncRNA | 0.40 | 2 | 46725225 | 46725564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496382 | LOC106588622 | coding | downstream | 84355 | 46577458 ~ 46640870 (-) |
| LOC110496379 | LOC106588596 | coding | downstream | 582494 | 46080497 ~ 46142731 (-) |
| LOC110496378 | LOC106588595 | coding | downstream | 650748 | 46061044 ~ 46074477 (-) |
| LOC110496377 | LOC106588592 | coding | downstream | 668274 | 46039651 ~ 46056951 (-) |
| LOC110496375 | LOC106588593 | coding | downstream | 696427 | 45911856 ~ 46028798 (-) |
| LOC110496384 | LOC106588605 | coding | upstream | 53531 | 46779095 ~ 46822848 (-) |
| trappc9 | trappc9 | coding | upstream | 131897 | 46857461 ~ 47141015 (-) |
| LOC110496386 | LOC106588618 | coding | upstream | 422728 | 47148292 ~ 47153777 (-) |
| LOC110496387 | LOC106588616 | coding | upstream | 432401 | 47157965 ~ 47162827 (-) |
| LOC118940995 | NA | coding | upstream | 499432 | 47224996 ~ 47228743 (-) |
| G1554774 | NA | non-coding | downstream | 21102 | 46695415 ~ 46704123 (-) |
| LOC110496383 | LOC106588620 | non-coding | downstream | 50430 | 46672514 ~ 46756077 (-) |
| G1554758 | NA | non-coding | downstream | 66505 | 46658193 ~ 46658720 (-) |
| G1554667 | NA | non-coding | downstream | 209397 | 46486058 ~ 46515828 (-) |
| G1555097 | NA | non-coding | upstream | 83080 | 46808644 ~ 46808900 (-) |
| G1555105 | NA | non-coding | upstream | 90307 | 46815871 ~ 46816140 (-) |
| G1555109 | NA | non-coding | upstream | 92662 | 46818226 ~ 46818439 (-) |
| G1555114 | NA | non-coding | upstream | 101261 | 46826825 ~ 46827112 (-) |
| G1555116 | NA | non-coding | upstream | 104511 | 46830075 ~ 46830277 (-) |
| G1554091 | NA | other | downstream | 617123 | 46101248 ~ 46108102 (-) |
| G1553693 | LOC106588587 | other | downstream | 922177 | 45788099 ~ 45803048 (-) |
| G1553544 | NA | other | downstream | 1057485 | 45667361 ~ 45667740 (-) |
| G1552866 | LOC106588536 | other | downstream | 1637439 | 45047680 ~ 45087786 (-) |
| G1555168 | NA | other | upstream | 186413 | 46911977 ~ 46912915 (-) |
| G1555543 | NA | other | upstream | 817996 | 47543208 ~ 47546614 (-) |
| LOC110496837 | LOC106588626 | other | upstream | 1179275 | 47890580 ~ 47945574 (-) |
| LOC110496401 | LOC106588640 | other | upstream | 1257319 | 47982726 ~ 47986560 (-) |
| G1556577 | NA | other | upstream | 1631049 | 48356613 ~ 48356847 (-) |
