Gene
RNA
| Item | Value |
|---|---|
| gene id | G1555097 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 46808644 ~ 46808900 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1779224 | True | 257 | lncRNA | 0.49 | 1 | 46808644 | 46808900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496383 | LOC106588620 | coding | downstream | 52567 | 46672514 ~ 46756077 (-) |
| LOC110496382 | LOC106588622 | coding | downstream | 167774 | 46577458 ~ 46640870 (-) |
| LOC110496379 | LOC106588596 | coding | downstream | 665913 | 46080497 ~ 46142731 (-) |
| LOC110496378 | LOC106588595 | coding | downstream | 734167 | 46061044 ~ 46074477 (-) |
| LOC110496377 | LOC106588592 | coding | downstream | 751693 | 46039651 ~ 46056951 (-) |
| trappc9 | trappc9 | coding | upstream | 48561 | 46857461 ~ 47141015 (-) |
| LOC110496386 | LOC106588618 | coding | upstream | 339392 | 47148292 ~ 47153777 (-) |
| LOC110496387 | LOC106588616 | coding | upstream | 349065 | 47157965 ~ 47162827 (-) |
| LOC118940995 | NA | coding | upstream | 416096 | 47224996 ~ 47228743 (-) |
| LOC118941173 | NA | coding | upstream | 430232 | 47239132 ~ 47241438 (-) |
| G1554790 | NA | non-coding | downstream | 83080 | 46725225 ~ 46725564 (-) |
| G1554774 | NA | non-coding | downstream | 104521 | 46695415 ~ 46704123 (-) |
| G1554758 | NA | non-coding | downstream | 149924 | 46658193 ~ 46658720 (-) |
| G1555105 | NA | non-coding | upstream | 6971 | 46815871 ~ 46816140 (-) |
| G1555109 | NA | non-coding | upstream | 9326 | 46818226 ~ 46818439 (-) |
| G1555114 | NA | non-coding | upstream | 17925 | 46826825 ~ 46827112 (-) |
| G1555116 | NA | non-coding | upstream | 21175 | 46830075 ~ 46830277 (-) |
| G1555142 | NA | non-coding | upstream | 50998 | 46859898 ~ 46860396 (-) |
| G1554091 | NA | other | downstream | 700542 | 46101248 ~ 46108102 (-) |
| G1553693 | LOC106588587 | other | downstream | 1005596 | 45788099 ~ 45803048 (-) |
| G1553544 | NA | other | downstream | 1140904 | 45667361 ~ 45667740 (-) |
| G1552866 | LOC106588536 | other | downstream | 1720858 | 45047680 ~ 45087786 (-) |
| G1555168 | NA | other | upstream | 103077 | 46911977 ~ 46912915 (-) |
| G1555543 | NA | other | upstream | 734660 | 47543208 ~ 47546614 (-) |
| LOC110496837 | LOC106588626 | other | upstream | 1095939 | 47890580 ~ 47945574 (-) |
| LOC110496401 | LOC106588640 | other | upstream | 1173983 | 47982726 ~ 47986560 (-) |
| G1556577 | NA | other | upstream | 1547713 | 48356613 ~ 48356847 (-) |
