G1555458


Basic Information

Item Value
gene id G1555458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 47303843 ~ 47304298 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1779647
agatctgccagtcgaccagactcttccagatctgcccgtcgtccagactcttccagatctgcccgtcgtccagactcttccagatctgcccgtcgtccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgtccagactcttccagatctgccagtcgtccagactcttccagatccgccagtcgaccagattctcccagatccgccagtcgaccagattctcccagatccgccagtcgaccagattctcccagatccgccagtcgaccagattctcccagatccgccagtcgaccagattct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106566445

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1779647 True 456 lncRNA 0.57 1 47303843 47304298

Neighbor

gene id symbol gene type direction distance location
LOC118941176 NA coding downstream 11635 47258150 ~ 47292208 (-)
LOC118941174 NA coding downstream 52876 47248660 ~ 47250967 (-)
LOC118941173 NA coding downstream 62405 47239132 ~ 47241438 (-)
LOC118940995 NA coding downstream 75100 47224996 ~ 47228743 (-)
LOC110496387 LOC106588616 coding downstream 141016 47157965 ~ 47162827 (-)
LOC110496393 LOC106588612 coding upstream 22651 47326949 ~ 47328359 (-)
LOC110496398 LOC106588638 coding upstream 332223 47636521 ~ 47647411 (-)
LOC110496399 NA coding upstream 502781 47807079 ~ 47808361 (-)
LOC110496837 LOC106588626 coding upstream 586282 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 coding upstream 678428 47982726 ~ 47986560 (-)
G1555456 NA non-coding downstream 2315 47301182 ~ 47301528 (-)
G1555454 NA non-coding downstream 4333 47299281 ~ 47299510 (-)
G1555331 NA non-coding downstream 82887 47220732 ~ 47220956 (-)
G1555314 NA non-coding downstream 108337 47190003 ~ 47195506 (-)
G1555306 NA non-coding downstream 129331 47174235 ~ 47174512 (-)
G1555467 NA non-coding upstream 16848 47321146 ~ 47326023 (-)
G1555469 LOC106588611 non-coding upstream 28290 47332588 ~ 47410478 (-)
G1555473 NA non-coding upstream 34273 47338571 ~ 47376258 (-)
G1555531 NA non-coding upstream 177047 47481345 ~ 47481802 (-)
G1555532 NA non-coding upstream 183991 47488289 ~ 47490122 (-)
G1555168 NA other downstream 390928 46911977 ~ 46912915 (-)
G1554091 NA other downstream 1195741 46101248 ~ 46108102 (-)
G1553693 LOC106588587 other downstream 1500795 45788099 ~ 45803048 (-)
G1553544 NA other downstream 1636103 45667361 ~ 45667740 (-)
G1552875 LOC106588536 other downstream 2230503 45065134 ~ 45073340 (-)
G1555543 NA other upstream 239262 47543208 ~ 47546614 (-)
G1556577 NA other upstream 1052315 48356613 ~ 48356847 (-)
G1558535 NA other upstream 2663598 49967896 ~ 49968608 (-)

Expression


Co-expression Network