Gene
RNA
| Item | Value |
|---|---|
| gene id | G1555420 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47483356 ~ 47485192 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1779588 | False | 983 | TUCP | 0.59 | 2 | 47483356 | 47485192 |
| TU1779589 | True | 292 | lncRNA | 0.60 | 2 | 47483356 | 47485192 |
47,480,000
47,480,400
47,480,800
47,481,200
47,481,600
47,482,000
47,482,400
47,482,800
47,483,200
47,483,600
47,484,000
47,484,400
47,484,800
47,485,200
47,485,600
47,486,000
47,486,400
47,486,800
47,487,200
47,487,600
NC_048582.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496394 | LOC106588610 | coding | upstream | 116863 | 47361958 ~ 47366493 (+) |
| LOC110496392 | nudc | coding | upstream | 143510 | 47329603 ~ 47339846 (+) |
| LOC110496391 | LOC106588613 | coding | upstream | 162084 | 47317827 ~ 47321272 (+) |
| LOC110496390 | NA | coding | upstream | 201343 | 47279653 ~ 47282013 (+) |
| LOC118941175 | NA | coding | upstream | 210876 | 47270121 ~ 47272480 (+) |
| LOC110496396 | LOC106588636 | coding | downstream | 38598 | 47523790 ~ 47533373 (+) |
| LOC110496397 | LOC106588637 | coding | downstream | 48585 | 47533777 ~ 47545346 (+) |
| LOC110496400 | LOC106588639 | coding | downstream | 315621 | 47800813 ~ 47826805 (+) |
| LOC110496404 | LOC106588645 | coding | downstream | 588701 | 48073893 ~ 48109017 (+) |
| LOC110496405 | LOC106588646 | coding | downstream | 647118 | 48132310 ~ 48140645 (+) |
| G1555369 | NA | non-coding | upstream | 154236 | 47328788 ~ 47329120 (+) |
| G1555367 | NA | non-coding | upstream | 172691 | 47310436 ~ 47310665 (+) |
| G1555366 | NA | non-coding | upstream | 180856 | 47302286 ~ 47302500 (+) |
| G1555341 | NA | non-coding | upstream | 222118 | 47251337 ~ 47261238 (+) |
| G1555054 | NA | non-coding | upstream | 309147 | 47173920 ~ 47174209 (+) |
| G1555436 | NA | non-coding | downstream | 53123 | 47538315 ~ 47538642 (+) |
| G1555437 | NA | non-coding | downstream | 53579 | 47538771 ~ 47538998 (+) |
| G1555580 | NA | non-coding | downstream | 77058 | 47562250 ~ 47562495 (+) |
| G1555672 | NA | non-coding | downstream | 133937 | 47619129 ~ 47619409 (+) |
| G1555679 | NA | non-coding | downstream | 140859 | 47626051 ~ 47626280 (+) |
| LOC110496389 | LOC106588614 | other | upstream | 281320 | 47200301 ~ 47202906 (+) |
| G1554912 | NA | other | upstream | 566396 | 46911533 ~ 46916960 (+) |
| G1554852 | LOC106588605 | other | upstream | 660872 | 46822126 ~ 46822484 (+) |
| G1554410 | NA | other | upstream | 843247 | 46577330 ~ 46640109 (+) |
| khdrbs3 | LOC106588624 | other | upstream | 1075843 | 46301213 ~ 46444565 (+) |
| G1555433 | NA | other | downstream | 42553 | 47527745 ~ 47528039 (+) |
| G1556007 | NA | other | downstream | 415277 | 47900469 ~ 47901628 (+) |
| G1556006 | LOC106588626 | other | downstream | 417663 | 47902855 ~ 47903371 (+) |
| G1556003 | LOC106588626 | other | downstream | 418657 | 47903849 ~ 47905387 (+) |
| G1556127 | NA | other | downstream | 589444 | 48074636 ~ 48112652 (+) |
