Gene
RNA
| Item | Value |
|---|---|
| gene id | G1555679 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47626051 ~ 47626280 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1779913 | True | 230 | lncRNA | 0.51 | 1 | 47626051 | 47626280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496397 | LOC106588637 | coding | upstream | 80705 | 47533777 ~ 47545346 (+) |
| LOC110496396 | LOC106588636 | coding | upstream | 92678 | 47523790 ~ 47533373 (+) |
| LOC110496395 | LOC106588635 | coding | upstream | 108365 | 47405537 ~ 47517686 (+) |
| LOC110496394 | LOC106588610 | coding | upstream | 259558 | 47361958 ~ 47366493 (+) |
| LOC110496392 | nudc | coding | upstream | 286205 | 47329603 ~ 47339846 (+) |
| LOC110496400 | LOC106588639 | coding | downstream | 174533 | 47800813 ~ 47826805 (+) |
| LOC110496404 | LOC106588645 | coding | downstream | 447613 | 48073893 ~ 48109017 (+) |
| LOC110496405 | LOC106588646 | coding | downstream | 506030 | 48132310 ~ 48140645 (+) |
| LOC110496406 | LOC106588634 | coding | downstream | 1175264 | 48801544 ~ 48802991 (+) |
| LOC110496411 | NA | coding | downstream | 1209387 | 48835667 ~ 48838643 (+) |
| G1555672 | NA | non-coding | upstream | 6642 | 47619129 ~ 47619409 (+) |
| G1555580 | NA | non-coding | upstream | 63556 | 47562250 ~ 47562495 (+) |
| G1555437 | NA | non-coding | upstream | 87053 | 47538771 ~ 47538998 (+) |
| G1555436 | NA | non-coding | upstream | 87409 | 47538315 ~ 47538642 (+) |
| G1555420 | NA | non-coding | upstream | 140859 | 47483356 ~ 47485192 (+) |
| G1555694 | LOC106588638 | non-coding | downstream | 10241 | 47636521 ~ 47639508 (+) |
| G1555705 | NA | non-coding | downstream | 25728 | 47652008 ~ 47652213 (+) |
| G1555707 | NA | non-coding | downstream | 26613 | 47652893 ~ 47653174 (+) |
| G1555721 | NA | non-coding | downstream | 38576 | 47664856 ~ 47665073 (+) |
| G1555744 | NA | non-coding | downstream | 50801 | 47677081 ~ 47677286 (+) |
| G1555433 | NA | other | upstream | 98012 | 47527745 ~ 47528039 (+) |
| LOC110496389 | LOC106588614 | other | upstream | 424015 | 47200301 ~ 47202906 (+) |
| G1554912 | NA | other | upstream | 709091 | 46911533 ~ 46916960 (+) |
| G1554852 | LOC106588605 | other | upstream | 803567 | 46822126 ~ 46822484 (+) |
| G1556007 | NA | other | downstream | 274189 | 47900469 ~ 47901628 (+) |
| G1556006 | LOC106588626 | other | downstream | 276575 | 47902855 ~ 47903371 (+) |
| G1556003 | LOC106588626 | other | downstream | 277569 | 47903849 ~ 47905387 (+) |
| G1556127 | NA | other | downstream | 448356 | 48074636 ~ 48112652 (+) |
| G1557717 | NA | other | downstream | 1919269 | 49545549 ~ 49545809 (+) |
