Gene
RNA
| Item | Value |
|---|---|
| gene id | G1555682 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47626820 ~ 47627048 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1779916 | True | 229 | lncRNA | 0.51 | 1 | 47626820 | 47627048 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496393 | LOC106588612 | coding | downstream | 298461 | 47326949 ~ 47328359 (-) |
| LOC118941176 | NA | coding | downstream | 334612 | 47258150 ~ 47292208 (-) |
| LOC118941174 | NA | coding | downstream | 375853 | 47248660 ~ 47250967 (-) |
| LOC118941173 | NA | coding | downstream | 385382 | 47239132 ~ 47241438 (-) |
| LOC118940995 | NA | coding | downstream | 398077 | 47224996 ~ 47228743 (-) |
| LOC110496398 | LOC106588638 | coding | upstream | 9473 | 47636521 ~ 47647411 (-) |
| LOC110496399 | NA | coding | upstream | 180031 | 47807079 ~ 47808361 (-) |
| LOC110496837 | LOC106588626 | coding | upstream | 263532 | 47890580 ~ 47945574 (-) |
| LOC110496401 | LOC106588640 | coding | upstream | 355678 | 47982726 ~ 47986560 (-) |
| LOC110496402 | LOC106588641 | coding | upstream | 374838 | 48001886 ~ 48022110 (-) |
| G1555585 | NA | non-coding | downstream | 62561 | 47563995 ~ 47564259 (-) |
| G1555581 | NA | non-coding | downstream | 63970 | 47562594 ~ 47562850 (-) |
| G1555575 | NA | non-coding | downstream | 65997 | 47560607 ~ 47560823 (-) |
| G1555567 | NA | non-coding | downstream | 78711 | 47547894 ~ 47548109 (-) |
| G1555566 | NA | non-coding | downstream | 79263 | 47547207 ~ 47547557 (-) |
| G1555699 | NA | non-coding | upstream | 14357 | 47641405 ~ 47642527 (-) |
| G1555731 | NA | non-coding | upstream | 42993 | 47670041 ~ 47670560 (-) |
| G1555758 | NA | non-coding | upstream | 59924 | 47686972 ~ 47687283 (-) |
| G1555868 | NA | non-coding | upstream | 65890 | 47692938 ~ 47722383 (-) |
| G1555883 | NA | non-coding | upstream | 89333 | 47716381 ~ 47724569 (-) |
| G1555543 | NA | other | downstream | 80249 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 713905 | 46911977 ~ 46912915 (-) |
| G1554091 | NA | other | downstream | 1518718 | 46101248 ~ 46108102 (-) |
| G1553693 | LOC106588587 | other | downstream | 1823772 | 45788099 ~ 45803048 (-) |
| G1553544 | NA | other | downstream | 1959080 | 45667361 ~ 45667740 (-) |
| G1556577 | NA | other | upstream | 729565 | 48356613 ~ 48356847 (-) |
| G1558535 | NA | other | upstream | 2340848 | 49967896 ~ 49968608 (-) |
| LOC110496434 | LOC106588680 | other | upstream | 2396043 | 50023087 ~ 50034167 (-) |
