Gene
RNA
| Item | Value |
|---|---|
| gene id | G1556331 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 48018766 ~ 48079170 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1780607 | True | 351 | lncRNA | 0.44 | 2 | 48018766 | 48079170 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496401 | LOC106588640 | coding | downstream | 32206 | 47982726 ~ 47986560 (-) |
| LOC110496837 | LOC106588626 | coding | downstream | 91751 | 47890580 ~ 47945574 (-) |
| LOC110496399 | NA | coding | downstream | 210405 | 47807079 ~ 47808361 (-) |
| LOC110496398 | LOC106588638 | coding | downstream | 371355 | 47636521 ~ 47647411 (-) |
| LOC110496393 | LOC106588612 | coding | downstream | 690407 | 47326949 ~ 47328359 (-) |
| LOC110496838 | LOC106570261 | coding | upstream | 312745 | 48391915 ~ 48661347 (-) |
| LOC110496839 | LOC106588648 | coding | upstream | 650055 | 48729225 ~ 48730477 (-) |
| LOC118941178 | NA | coding | upstream | 675360 | 48754530 ~ 48755869 (-) |
| LOC110496407 | LOC106588649 | coding | upstream | 739767 | 48818937 ~ 48828082 (-) |
| LOC118941242 | NA | coding | upstream | 748799 | 48827969 ~ 48828104 (-) |
| G1556323 | NA | non-coding | downstream | 10666 | 48007900 ~ 48008100 (-) |
| G1556319 | NA | non-coding | downstream | 13867 | 48004669 ~ 48004899 (-) |
| G1556318 | NA | non-coding | downstream | 15269 | 48003178 ~ 48003497 (-) |
| G1556311 | NA | non-coding | downstream | 27563 | 47990953 ~ 47991203 (-) |
| G1556310 | NA | non-coding | downstream | 28559 | 47990002 ~ 47990207 (-) |
| G1556545 | NA | non-coding | upstream | 258666 | 48337836 ~ 48338051 (-) |
| G1556552 | NA | non-coding | upstream | 261567 | 48340737 ~ 48340986 (-) |
| G1556564 | NA | non-coding | upstream | 267739 | 48346909 ~ 48347205 (-) |
| G1556576 | NA | non-coding | upstream | 276517 | 48355687 ~ 48356091 (-) |
| G1556587 | NA | non-coding | upstream | 284706 | 48363876 ~ 48364078 (-) |
| G1555543 | NA | other | downstream | 472195 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 1105851 | 46911977 ~ 46912915 (-) |
| G1554091 | NA | other | downstream | 1910664 | 46101248 ~ 46108102 (-) |
| G1556577 | NA | other | upstream | 277443 | 48356613 ~ 48356847 (-) |
| G1558535 | NA | other | upstream | 1888726 | 49967896 ~ 49968608 (-) |
| LOC110496434 | LOC106588680 | other | upstream | 1943921 | 50023087 ~ 50034167 (-) |
| LOC110496438 | LOC106588686 | other | upstream | 2277099 | 50256021 ~ 50359132 (-) |
| G1558916 | NA | other | upstream | 2357827 | 50436997 ~ 50437459 (-) |
