Gene
RNA
| Item | Value |
|---|---|
| gene id | G1556139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 48085620 ~ 48086014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1780409 | True | 235 | lncRNA | 0.46 | 2 | 48085620 | 48086014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496400 | LOC106588639 | coding | upstream | 258815 | 47800813 ~ 47826805 (+) |
| LOC110496397 | LOC106588637 | coding | upstream | 540274 | 47533777 ~ 47545346 (+) |
| LOC110496396 | LOC106588636 | coding | upstream | 552247 | 47523790 ~ 47533373 (+) |
| LOC110496395 | LOC106588635 | coding | upstream | 567934 | 47405537 ~ 47517686 (+) |
| LOC110496394 | LOC106588610 | coding | upstream | 719127 | 47361958 ~ 47366493 (+) |
| LOC110496405 | LOC106588646 | coding | downstream | 46296 | 48132310 ~ 48140645 (+) |
| LOC110496406 | LOC106588634 | coding | downstream | 715530 | 48801544 ~ 48802991 (+) |
| LOC110496411 | NA | coding | downstream | 749653 | 48835667 ~ 48838643 (+) |
| LOC118941233 | NA | coding | downstream | 750470 | 48836484 ~ 48836619 (+) |
| LOC118941232 | NA | coding | downstream | 750799 | 48836813 ~ 48836892 (+) |
| G1556098 | NA | non-coding | upstream | 49312 | 48035629 ~ 48036308 (+) |
| G1556083 | LOC106588641 | non-coding | upstream | 72402 | 48012302 ~ 48013218 (+) |
| G1556082 | NA | non-coding | upstream | 73639 | 48011527 ~ 48011981 (+) |
| G1556078 | NA | non-coding | upstream | 79981 | 48005254 ~ 48005639 (+) |
| G1556077 | LOC106588641 | non-coding | upstream | 81153 | 48003689 ~ 48004467 (+) |
| G1556127 | NA | non-coding | downstream | 26198 | 48074636 ~ 48112652 (+) |
| G1556237 | NA | non-coding | downstream | 172363 | 48258377 ~ 48259787 (+) |
| G1556544 | NA | non-coding | downstream | 249245 | 48335259 ~ 48335604 (+) |
| G1556546 | NA | non-coding | downstream | 252443 | 48338457 ~ 48338697 (+) |
| G1556556 | NA | non-coding | downstream | 257296 | 48343310 ~ 48343551 (+) |
| G1556003 | LOC106588626 | other | upstream | 180233 | 47903849 ~ 47905387 (+) |
| G1556006 | LOC106588626 | other | upstream | 182249 | 47902855 ~ 47903371 (+) |
| G1556007 | NA | other | upstream | 183992 | 47900469 ~ 47901628 (+) |
| G1555433 | NA | other | upstream | 557581 | 47527745 ~ 47528039 (+) |
| G1555420 | NA | other | upstream | 600428 | 47483356 ~ 47485192 (+) |
| G1557717 | NA | other | downstream | 1459535 | 49545549 ~ 49545809 (+) |
| G1557814 | NA | other | downstream | 1674414 | 49760428 ~ 49760966 (+) |
| G1558443 | NA | other | downstream | 2133740 | 50219754 ~ 50220127 (+) |
| G1559041 | thsd7a | other | downstream | 2547729 | 50633743 ~ 50635566 (+) |
| LOC110496482 | LOC106588780 | other | downstream | 3980828 | 52036488 ~ 52083470 (+) |
