Gene
RNA
| Item | Value |
|---|---|
| gene id | G1557178 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 48698360 ~ 48698613 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1781505 | True | 254 | lncRNA | 0.39 | 1 | 48698360 | 48698613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496838 | LOC106570261 | coding | downstream | 37013 | 48391915 ~ 48661347 (-) |
| LOC118941177 | LOC106588644 | coding | downstream | 636198 | 48057022 ~ 48062162 (-) |
| LOC110496403 | LOC106570256 | coding | downstream | 648640 | 48037858 ~ 48049720 (-) |
| LOC110496402 | LOC106588641 | coding | downstream | 676250 | 48001886 ~ 48022110 (-) |
| LOC110496401 | LOC106588640 | coding | downstream | 711800 | 47982726 ~ 47986560 (-) |
| LOC110496839 | LOC106588648 | coding | upstream | 30612 | 48729225 ~ 48730477 (-) |
| LOC118941178 | NA | coding | upstream | 55917 | 48754530 ~ 48755869 (-) |
| LOC110496407 | LOC106588649 | coding | upstream | 120324 | 48818937 ~ 48828082 (-) |
| LOC118941242 | NA | coding | upstream | 129356 | 48827969 ~ 48828104 (-) |
| LOC110496408 | rb39b | coding | upstream | 130575 | 48829188 ~ 48834648 (-) |
| G1557175 | NA | non-coding | downstream | 1645 | 48696495 ~ 48696715 (-) |
| G1557166 | NA | non-coding | downstream | 9238 | 48688255 ~ 48689122 (-) |
| G1557165 | NA | non-coding | downstream | 10457 | 48687496 ~ 48687903 (-) |
| G1557132 | NA | non-coding | downstream | 52580 | 48642425 ~ 48645780 (-) |
| G1557116 | NA | non-coding | downstream | 59428 | 48617333 ~ 48638932 (-) |
| G1557184 | NA | non-coding | upstream | 7177 | 48705790 ~ 48706011 (-) |
| G1557188 | NA | non-coding | upstream | 16950 | 48715563 ~ 48715767 (-) |
| G1557202 | NA | non-coding | upstream | 35944 | 48734557 ~ 48734788 (-) |
| G1557360 | NA | non-coding | upstream | 331156 | 49029769 ~ 49030016 (-) |
| G1557376 | NA | non-coding | upstream | 341567 | 49040180 ~ 49040452 (-) |
| G1556577 | NA | other | downstream | 341513 | 48356613 ~ 48356847 (-) |
| LOC110496837 | LOC106588626 | other | downstream | 752786 | 47890580 ~ 47945574 (-) |
| G1555543 | NA | other | downstream | 1151789 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 1785445 | 46911977 ~ 46912915 (-) |
| G1558535 | NA | other | upstream | 1269283 | 49967896 ~ 49968608 (-) |
| LOC110496434 | LOC106588680 | other | upstream | 1324478 | 50023087 ~ 50034167 (-) |
| LOC110496438 | LOC106588686 | other | upstream | 1657656 | 50256021 ~ 50359132 (-) |
| G1558916 | NA | other | upstream | 1738384 | 50436997 ~ 50437459 (-) |
| G1559205 | NA | other | upstream | 1924478 | 50623091 ~ 50623983 (-) |
