G1557360



Basic Information


Item Value
gene id G1557360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 49029769 ~ 49030016 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1781700
ATGTCCCTTCACTCTTCCACCCCTTTTCTGATAGAGTATGAAAAGCTGTAGTCAAGGGGGAGGCTTCAATAAGAGCAGCACTACAGTCTGATGACAGCCATATTTCAGTGAGAAACATGCATATCAACATTGACGCTCAGTAATGAGGTCATTCAAGAGAAAGGTTTTACTTGTGATTGCTCTAACATTTAAAAGCTCCATATTCAATAAGTGTGGGCCACTCTGCCCCTGGGGCATCTACTTCGAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1781700 True 248 lncRNA 0.43 1 49029769 49030016

Neighbor


gene id symbol gene type direction distance location
LOC110496409 LOC106588651 coding downstream 178534 48837413 ~ 48851235 (-)
LOC110496408 rb39b coding downstream 195121 48829188 ~ 48834648 (-)
LOC118941242 NA coding downstream 201665 48827969 ~ 48828104 (-)
LOC110496407 LOC106588649 coding downstream 201687 48818937 ~ 48828082 (-)
LOC118941178 NA coding downstream 273900 48754530 ~ 48755869 (-)
LOC110496413 LOC106588657 coding upstream 32715 49062731 ~ 49117216 (-)
LOC110496414 LOC106570277 coding upstream 93733 49123749 ~ 49131358 (-)
LOC110496416 LOC106588659 coding upstream 100912 49130928 ~ 49134380 (-)
LOC110496415 LOC106588660 coding upstream 106726 49134674 ~ 49146147 (-)
LOC110496840 LOC106588661 coding upstream 120269 49150285 ~ 49182882 (-)
G1557202 NA non-coding downstream 294981 48734557 ~ 48734788 (-)
G1557188 NA non-coding downstream 314002 48715563 ~ 48715767 (-)
G1557184 NA non-coding downstream 323758 48705790 ~ 48706011 (-)
G1557178 NA non-coding downstream 331156 48698360 ~ 48698613 (-)
G1557175 NA non-coding downstream 333054 48696495 ~ 48696715 (-)
G1557376 NA non-coding upstream 10164 49040180 ~ 49040452 (-)
G1557879 NA non-coding upstream 54656 49084672 ~ 49086021 (-)
G1557993 NA non-coding upstream 232641 49262657 ~ 49319527 (-)
G1558076 NA non-coding upstream 447336 49477352 ~ 49477569 (-)
G1556577 NA other downstream 672922 48356613 ~ 48356847 (-)
LOC110496401 LOC106588640 other downstream 1046160 47982726 ~ 47986560 (-)
LOC110496837 LOC106588626 other downstream 1084195 47890580 ~ 47945574 (-)
G1555543 NA other downstream 1483198 47543208 ~ 47546614 (-)
G1555168 NA other downstream 2116854 46911977 ~ 46912915 (-)
G1558535 NA other upstream 937880 49967896 ~ 49968608 (-)
LOC110496434 LOC106588680 other upstream 993075 50023087 ~ 50034167 (-)
LOC110496438 LOC106588686 other upstream 1326253 50256021 ~ 50359132 (-)
G1558916 NA other upstream 1406981 50436997 ~ 50437459 (-)
G1559205 NA other upstream 1593075 50623091 ~ 50623983 (-)

Expression



Co-expression Network