Gene
RNA
| Item | Value |
|---|---|
| gene id | G1558459 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 49876508 ~ 49884470 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Septin-7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1782996 | True | 301 | lncRNA | 0.47 | 2 | 49876508 | 49884470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496426 | LOC106588671 | coding | downstream | 79533 | 49767140 ~ 49796975 (-) |
| LOC100135978 | LOC106588669 | coding | downstream | 403379 | 49332681 ~ 49473129 (-) |
| LOC118940996 | NA | coding | downstream | 479041 | 49380856 ~ 49397467 (-) |
| LOC110496424 | LOC106588667 | coding | downstream | 579165 | 49295572 ~ 49297343 (-) |
| LOC110496421 | LOC106588664 | coding | downstream | 667025 | 49203985 ~ 49209483 (-) |
| LOC110496431 | LOC106588678 | coding | upstream | 88984 | 49973454 ~ 49982570 (-) |
| LOC110496434 | LOC106588680 | coding | upstream | 138617 | 50023087 ~ 50034167 (-) |
| LOC110496842 | LOC106588681 | coding | upstream | 220812 | 50105282 ~ 50143368 (-) |
| rfa3 | rfa3 | coding | upstream | 263834 | 50148304 ~ 50149605 (-) |
| LOC118941183 | NA | coding | upstream | 267553 | 50152023 ~ 50197214 (-) |
| G1558254 | NA | non-coding | downstream | 29082 | 49847163 ~ 49847426 (-) |
| G1558215 | NA | non-coding | downstream | 123416 | 49746279 ~ 49753092 (-) |
| G1558196 | NA | non-coding | downstream | 172163 | 49690614 ~ 49704345 (-) |
| G1558156 | NA | non-coding | downstream | 255920 | 49620389 ~ 49620588 (-) |
| G1558152 | NA | non-coding | downstream | 265248 | 49610686 ~ 49611260 (-) |
| G1558460 | NA | non-coding | upstream | 36727 | 49921197 ~ 49922691 (-) |
| G1558551 | NA | non-coding | upstream | 107639 | 49992109 ~ 50001982 (-) |
| G1558557 | NA | non-coding | upstream | 121874 | 50006344 ~ 50006578 (-) |
| G1558639 | NA | non-coding | upstream | 266428 | 50150898 ~ 50151114 (-) |
| G1558649 | NA | non-coding | upstream | 273329 | 50157799 ~ 50158258 (-) |
| G1556577 | NA | other | downstream | 1519661 | 48356613 ~ 48356847 (-) |
| LOC110496401 | LOC106588640 | other | downstream | 1892899 | 47982726 ~ 47986560 (-) |
| LOC110496837 | LOC106588626 | other | downstream | 1930934 | 47890580 ~ 47945574 (-) |
| G1555543 | NA | other | downstream | 2329937 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 2963593 | 46911977 ~ 46912915 (-) |
| G1558535 | NA | other | upstream | 83426 | 49967896 ~ 49968608 (-) |
| LOC110496438 | LOC106588686 | other | upstream | 471799 | 50256021 ~ 50359132 (-) |
| G1558916 | NA | other | upstream | 552527 | 50436997 ~ 50437459 (-) |
| G1559205 | NA | other | upstream | 738621 | 50623091 ~ 50623983 (-) |
