G1558713



Basic Information


Item Value
gene id G1558713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 50255547 ~ 50255929 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1783301
ctgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtctcttggggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttgaccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccatcccagtctcaggtcttttgcagactcc

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1783301 True 383 lncRNA 0.42 1 50255547 50255929

Neighbor


gene id symbol gene type direction distance location
LOC118941183 NA coding downstream 58333 50152023 ~ 50197214 (-)
rfa3 rfa3 coding downstream 105942 50148304 ~ 50149605 (-)
LOC110496842 LOC106588681 coding downstream 112179 50105282 ~ 50143368 (-)
LOC110496434 LOC106588680 coding downstream 221380 50023087 ~ 50034167 (-)
LOC110496431 LOC106588678 coding downstream 272977 49973454 ~ 49982570 (-)
LOC110496438 LOC106588686 coding upstream 92 50256021 ~ 50359132 (-)
LOC110496443 LOC106588718 coding upstream 287450 50543379 ~ 50592411 (-)
thsd7aa LOC106588717 coding upstream 344026 50599944 ~ 50755992 (-)
LOC110496448 LOC106588712 coding upstream 741594 50997523 ~ 51012139 (-)
LOC110496450 LOC106588689 coding upstream 790473 51046402 ~ 51049503 (-)
G1558711 NA non-coding downstream 141 50255080 ~ 50255406 (-)
G1558709 NA non-coding downstream 1384 50253707 ~ 50254163 (-)
G1558705 NA non-coding downstream 4091 50251231 ~ 50251456 (-)
G1558701 NA non-coding downstream 8920 50246252 ~ 50246627 (-)
G1558700 NA non-coding downstream 9439 50245861 ~ 50246108 (-)
G1558784 NA non-coding upstream 8628 50264557 ~ 50265875 (-)
G1558804 NA non-coding upstream 50828 50306757 ~ 50309048 (-)
G1558841 NA non-coding upstream 114712 50370641 ~ 50370910 (-)
G1558877 NA non-coding upstream 142917 50398846 ~ 50401375 (-)
G1558535 NA other downstream 286939 49967896 ~ 49968608 (-)
G1556577 NA other downstream 1898700 48356613 ~ 48356847 (-)
LOC110496401 LOC106588640 other downstream 2271938 47982726 ~ 47986560 (-)
LOC110496837 LOC106588626 other downstream 2309973 47890580 ~ 47945574 (-)
G1558916 NA other upstream 181068 50436997 ~ 50437459 (-)
G1559205 NA other upstream 367162 50623091 ~ 50623983 (-)
LOC110496463 LOC106588703 other upstream 957226 51213151 ~ 51214398 (-)

Expression



Co-expression Network