Gene
RNA
| Item | Value |
|---|---|
| gene id | G1559190 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50595408 ~ 50595621 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1783837 | True | 214 | lncRNA | 0.41 | 1 | 50595408 | 50595621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496443 | LOC106588718 | coding | downstream | 2997 | 50543379 ~ 50592411 (-) |
| LOC110496438 | LOC106588686 | coding | downstream | 236276 | 50256021 ~ 50359132 (-) |
| LOC118941183 | NA | coding | downstream | 398194 | 50152023 ~ 50197214 (-) |
| rfa3 | rfa3 | coding | downstream | 445803 | 50148304 ~ 50149605 (-) |
| LOC110496842 | LOC106588681 | coding | downstream | 452040 | 50105282 ~ 50143368 (-) |
| thsd7aa | LOC106588717 | coding | upstream | 4334 | 50599944 ~ 50755992 (-) |
| LOC110496448 | LOC106588712 | coding | upstream | 401902 | 50997523 ~ 51012139 (-) |
| LOC110496450 | LOC106588689 | coding | upstream | 450781 | 51046402 ~ 51049503 (-) |
| LOC110496449 | LOC106588710 | coding | upstream | 457146 | 51052767 ~ 51067584 (-) |
| agr2 | agr2 | coding | upstream | 498471 | 51094092 ~ 51096890 (-) |
| G1559159 | NA | non-coding | downstream | 63310 | 50531852 ~ 50532098 (-) |
| G1559152 | NA | non-coding | downstream | 71510 | 50523655 ~ 50523898 (-) |
| G1559148 | NA | non-coding | downstream | 77664 | 50517541 ~ 50517744 (-) |
| G1559116 | NA | non-coding | downstream | 110259 | 50463966 ~ 50485149 (-) |
| G1558940 | NA | non-coding | downstream | 140671 | 50454510 ~ 50454737 (-) |
| G1559195 | NA | non-coding | upstream | 14236 | 50609857 ~ 50610085 (-) |
| G1559196 | NA | non-coding | upstream | 14963 | 50610584 ~ 50610810 (-) |
| G1559212 | NA | non-coding | upstream | 35830 | 50631451 ~ 50631668 (-) |
| G1559227 | NA | non-coding | upstream | 59636 | 50655257 ~ 50655478 (-) |
| G1558916 | NA | other | downstream | 157949 | 50436997 ~ 50437459 (-) |
| LOC110496434 | LOC106588680 | other | downstream | 561267 | 50023087 ~ 50034167 (-) |
| G1558535 | NA | other | downstream | 626800 | 49967896 ~ 49968608 (-) |
| G1556577 | NA | other | downstream | 2238561 | 48356613 ~ 48356847 (-) |
| G1559205 | NA | other | upstream | 27470 | 50623091 ~ 50623983 (-) |
| LOC110496463 | LOC106588703 | other | upstream | 617534 | 51213151 ~ 51214398 (-) |
| G1560339 | NA | other | upstream | 787051 | 51381731 ~ 51455285 (-) |
| trak1b | LOC106588779 | other | upstream | 1583699 | 52179320 ~ 52240648 (-) |
