Gene
RNA
| Item | Value |
|---|---|
| gene id | G1559227 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50655257 ~ 50655478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1783874 | True | 222 | lncRNA | 0.40 | 1 | 50655257 | 50655478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496443 | LOC106588718 | coding | downstream | 62846 | 50543379 ~ 50592411 (-) |
| LOC110496438 | LOC106588686 | coding | downstream | 296125 | 50256021 ~ 50359132 (-) |
| LOC118941183 | NA | coding | downstream | 458043 | 50152023 ~ 50197214 (-) |
| rfa3 | rfa3 | coding | downstream | 505652 | 50148304 ~ 50149605 (-) |
| LOC110496842 | LOC106588681 | coding | downstream | 511889 | 50105282 ~ 50143368 (-) |
| LOC110496448 | LOC106588712 | coding | upstream | 342045 | 50997523 ~ 51012139 (-) |
| LOC110496450 | LOC106588689 | coding | upstream | 390924 | 51046402 ~ 51049503 (-) |
| LOC110496449 | LOC106588710 | coding | upstream | 397289 | 51052767 ~ 51067584 (-) |
| agr2 | agr2 | coding | upstream | 438614 | 51094092 ~ 51096890 (-) |
| LOC110496457 | LOC106588707 | coding | upstream | 446401 | 51101879 ~ 51114958 (-) |
| G1559212 | NA | non-coding | downstream | 23589 | 50631451 ~ 50631668 (-) |
| G1559196 | NA | non-coding | downstream | 44447 | 50610584 ~ 50610810 (-) |
| G1559195 | NA | non-coding | downstream | 45172 | 50609857 ~ 50610085 (-) |
| thsd7aa | LOC106588717 | non-coding | downstream | 45662 | 50599944 ~ 50755992 (-) |
| G1559190 | NA | non-coding | downstream | 59636 | 50595408 ~ 50595621 (-) |
| G1559229 | NA | non-coding | upstream | 2892 | 50658370 ~ 50658606 (-) |
| G1559253 | NA | non-coding | upstream | 61655 | 50717133 ~ 50717353 (-) |
| G1559259 | NA | non-coding | upstream | 68866 | 50724344 ~ 50724634 (-) |
| G1559277 | NA | non-coding | upstream | 87727 | 50743205 ~ 50743474 (-) |
| G1559282 | NA | non-coding | upstream | 96545 | 50752023 ~ 50752222 (-) |
| G1559205 | NA | other | downstream | 31274 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 217798 | 50436997 ~ 50437459 (-) |
| LOC110496434 | LOC106588680 | other | downstream | 621116 | 50023087 ~ 50034167 (-) |
| LOC110496463 | LOC106588703 | other | upstream | 557677 | 51213151 ~ 51214398 (-) |
| G1560339 | NA | other | upstream | 727194 | 51381731 ~ 51455285 (-) |
| trak1b | LOC106588779 | other | upstream | 1523842 | 52179320 ~ 52240648 (-) |
| G1561167 | NA | other | upstream | 1593876 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 1701274 | 52352725 ~ 52396978 (-) |
