Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560048 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50823052 ~ 50827733 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1784759 | True | 223 | lncRNA | 0.34 | 2 | 50823052 | 50827733 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| thsd7aa | LOC106588717 | coding | downstream | 67060 | 50599944 ~ 50755992 (-) |
| LOC110496443 | LOC106588718 | coding | downstream | 230641 | 50543379 ~ 50592411 (-) |
| LOC110496438 | LOC106588686 | coding | downstream | 463920 | 50256021 ~ 50359132 (-) |
| LOC118941183 | NA | coding | downstream | 625838 | 50152023 ~ 50197214 (-) |
| rfa3 | rfa3 | coding | downstream | 673447 | 50148304 ~ 50149605 (-) |
| LOC110496448 | LOC106588712 | coding | upstream | 169790 | 50997523 ~ 51012139 (-) |
| LOC110496450 | LOC106588689 | coding | upstream | 218669 | 51046402 ~ 51049503 (-) |
| LOC110496449 | LOC106588710 | coding | upstream | 225034 | 51052767 ~ 51067584 (-) |
| agr2 | agr2 | coding | upstream | 266359 | 51094092 ~ 51096890 (-) |
| LOC110496457 | LOC106588707 | coding | upstream | 274146 | 51101879 ~ 51114958 (-) |
| G1559298 | NA | non-coding | downstream | 47046 | 50775791 ~ 50776006 (-) |
| G1559293 | NA | non-coding | downstream | 51201 | 50771414 ~ 50771851 (-) |
| G1559286 | NA | non-coding | downstream | 61708 | 50761076 ~ 50761344 (-) |
| G1559282 | NA | non-coding | downstream | 70830 | 50752023 ~ 50752222 (-) |
| G1559277 | NA | non-coding | downstream | 79578 | 50743205 ~ 50743474 (-) |
| G1560064 | LOC106588714 | non-coding | upstream | 37523 | 50865256 ~ 50866640 (-) |
| G1560073 | NA | non-coding | upstream | 42560 | 50870293 ~ 50882732 (-) |
| G1560082 | NA | non-coding | upstream | 55071 | 50882804 ~ 50883054 (-) |
| G1560085 | NA | non-coding | upstream | 117483 | 50945216 ~ 50952445 (-) |
| G1560118 | NA | non-coding | upstream | 118799 | 50946532 ~ 50953707 (-) |
| G1559205 | NA | other | downstream | 199069 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 385593 | 50436997 ~ 50437459 (-) |
| LOC110496434 | LOC106588680 | other | downstream | 788911 | 50023087 ~ 50034167 (-) |
| LOC110496463 | LOC106588703 | other | upstream | 385422 | 51213151 ~ 51214398 (-) |
| G1560339 | NA | other | upstream | 554939 | 51381731 ~ 51455285 (-) |
| trak1b | LOC106588779 | other | upstream | 1351587 | 52179320 ~ 52240648 (-) |
| G1561167 | NA | other | upstream | 1421621 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 1529019 | 52352725 ~ 52396978 (-) |
