Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 51021497 ~ 51021912 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1784890 | True | 359 | lncRNA | 0.39 | 2 | 51021497 | 51021912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496448 | LOC106588712 | coding | downstream | 9358 | 50997523 ~ 51012139 (-) |
| thsd7aa | LOC106588717 | coding | downstream | 265505 | 50599944 ~ 50755992 (-) |
| LOC110496443 | LOC106588718 | coding | downstream | 429086 | 50543379 ~ 50592411 (-) |
| LOC110496438 | LOC106588686 | coding | downstream | 662365 | 50256021 ~ 50359132 (-) |
| LOC118941183 | NA | coding | downstream | 824283 | 50152023 ~ 50197214 (-) |
| LOC110496450 | LOC106588689 | coding | upstream | 24490 | 51046402 ~ 51049503 (-) |
| LOC110496449 | LOC106588710 | coding | upstream | 30855 | 51052767 ~ 51067584 (-) |
| agr2 | agr2 | coding | upstream | 72180 | 51094092 ~ 51096890 (-) |
| LOC110496457 | LOC106588707 | coding | upstream | 79967 | 51101879 ~ 51114958 (-) |
| LOC110496456 | abcf1 | coding | upstream | 95749 | 51117661 ~ 51149891 (-) |
| G1560118 | NA | non-coding | downstream | 67790 | 50946532 ~ 50953707 (-) |
| G1560085 | NA | non-coding | downstream | 69052 | 50945216 ~ 50952445 (-) |
| G1560082 | NA | non-coding | downstream | 138443 | 50882804 ~ 50883054 (-) |
| G1560073 | NA | non-coding | downstream | 138765 | 50870293 ~ 50882732 (-) |
| G1560064 | LOC106588714 | non-coding | downstream | 154857 | 50865256 ~ 50866640 (-) |
| G1560205 | LOC106588711 | non-coding | upstream | 62002 | 51083914 ~ 51084398 (-) |
| G1560208 | NA | non-coding | upstream | 63975 | 51085887 ~ 51086600 (-) |
| G1560214 | NA | non-coding | upstream | 69289 | 51091201 ~ 51100402 (-) |
| G1560222 | NA | non-coding | upstream | 110840 | 51132752 ~ 51138114 (-) |
| G1559205 | NA | other | downstream | 397514 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 584038 | 50436997 ~ 50437459 (-) |
| LOC110496434 | LOC106588680 | other | downstream | 987356 | 50023087 ~ 50034167 (-) |
| LOC110496463 | LOC106588703 | other | upstream | 191243 | 51213151 ~ 51214398 (-) |
| G1560339 | NA | other | upstream | 360760 | 51381731 ~ 51455285 (-) |
| trak1b | LOC106588779 | other | upstream | 1157408 | 52179320 ~ 52240648 (-) |
| G1561167 | NA | other | upstream | 1227442 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 1334840 | 52352725 ~ 52396978 (-) |
