Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560249 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 51206848 ~ 51207067 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1784995 | True | 220 | lncRNA | 0.40 | 1 | 51206848 | 51207067 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496461 | lpcat1 | coding | downstream | 1616 | 51168766 ~ 51205232 (-) |
| LOC110496455 | LOC106588704 | coding | downstream | 38710 | 51155414 ~ 51168138 (-) |
| LOC110496456 | abcf1 | coding | downstream | 56957 | 51117661 ~ 51149891 (-) |
| LOC110496457 | LOC106588707 | coding | downstream | 91890 | 51101879 ~ 51114958 (-) |
| agr2 | agr2 | coding | downstream | 109958 | 51094092 ~ 51096890 (-) |
| LOC110496463 | LOC106588703 | coding | upstream | 6084 | 51213151 ~ 51214398 (-) |
| LOC110496464 | LOC106588701 | coding | upstream | 23411 | 51230478 ~ 51234928 (-) |
| LOC110496466 | LOC106588698 | coding | upstream | 219673 | 51426740 ~ 51429376 (-) |
| LOC110496470 | LOC106588694 | coding | upstream | 279545 | 51486612 ~ 51503794 (-) |
| trak1b | LOC106588779 | coding | upstream | 972253 | 52179320 ~ 52240648 (-) |
| G1560222 | NA | non-coding | downstream | 68734 | 51132752 ~ 51138114 (-) |
| G1560214 | NA | non-coding | downstream | 106446 | 51091201 ~ 51100402 (-) |
| G1560208 | NA | non-coding | downstream | 120248 | 51085887 ~ 51086600 (-) |
| G1560205 | LOC106588711 | non-coding | downstream | 122450 | 51083914 ~ 51084398 (-) |
| G1560251 | NA | non-coding | upstream | 939 | 51208006 ~ 51208214 (-) |
| G1560253 | NA | non-coding | upstream | 4229 | 51211296 ~ 51211705 (-) |
| G1560286 | NA | non-coding | upstream | 77165 | 51284232 ~ 51284547 (-) |
| G1560299 | NA | non-coding | upstream | 96562 | 51303629 ~ 51303836 (-) |
| G1560300 | NA | non-coding | upstream | 99071 | 51306138 ~ 51306338 (-) |
| thsd7aa | LOC106588717 | other | downstream | 556595 | 50599944 ~ 50755992 (-) |
| G1559205 | NA | other | downstream | 582865 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 769389 | 50436997 ~ 50437459 (-) |
| LOC110496438 | LOC106588686 | other | downstream | 847818 | 50256021 ~ 50359132 (-) |
| LOC110496434 | LOC106588680 | other | downstream | 1172707 | 50023087 ~ 50034167 (-) |
| G1560339 | NA | other | upstream | 175605 | 51381731 ~ 51455285 (-) |
| G1561167 | NA | other | upstream | 1042287 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 1149685 | 52352725 ~ 52396978 (-) |
