Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560406 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 51484246 ~ 51485096 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785189 | True | 791 | lncRNA | 0.44 | 2 | 51484246 | 51485096 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496466 | LOC106588698 | coding | downstream | 54870 | 51426740 ~ 51429376 (-) |
| LOC110496464 | LOC106588701 | coding | downstream | 249318 | 51230478 ~ 51234928 (-) |
| LOC110496463 | LOC106588703 | coding | downstream | 269848 | 51213151 ~ 51214398 (-) |
| LOC110496461 | lpcat1 | coding | downstream | 279014 | 51168766 ~ 51205232 (-) |
| LOC110496455 | LOC106588704 | coding | downstream | 316108 | 51155414 ~ 51168138 (-) |
| LOC110496470 | LOC106588694 | coding | upstream | 1516 | 51486612 ~ 51503794 (-) |
| trak1b | LOC106588779 | coding | upstream | 694224 | 52179320 ~ 52240648 (-) |
| zgc:110239 | LOC100846955 | coding | upstream | 767351 | 52252447 ~ 52259991 (-) |
| sytl1 | LOC106588777 | coding | upstream | 776271 | 52261367 ~ 52269318 (-) |
| LOC110519830 | LOC106588776 | coding | upstream | 786175 | 52271271 ~ 52281875 (-) |
| G1560339 | NA | non-coding | downstream | 28961 | 51381731 ~ 51455285 (-) |
| G1560300 | NA | non-coding | downstream | 177908 | 51306138 ~ 51306338 (-) |
| G1560299 | NA | non-coding | downstream | 180410 | 51303629 ~ 51303836 (-) |
| G1560286 | NA | non-coding | downstream | 199699 | 51284232 ~ 51284547 (-) |
| G1560253 | NA | non-coding | downstream | 272541 | 51211296 ~ 51211705 (-) |
| G1560419 | NA | non-coding | upstream | 40790 | 51525886 ~ 51526519 (-) |
| G1560418 | NA | non-coding | upstream | 41520 | 51526616 ~ 51527950 (-) |
| G1560422 | NA | non-coding | upstream | 43837 | 51528933 ~ 51529135 (-) |
| G1560429 | NA | non-coding | upstream | 55966 | 51541062 ~ 51542056 (-) |
| G1560340 | NA | non-coding | upstream | 63313 | 51548409 ~ 51548856 (-) |
| thsd7aa | LOC106588717 | other | downstream | 833993 | 50599944 ~ 50755992 (-) |
| G1559205 | NA | other | downstream | 860263 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 1046787 | 50436997 ~ 50437459 (-) |
| G1561167 | NA | other | upstream | 764258 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 871656 | 52352725 ~ 52396978 (-) |
| G1561279 | NA | other | upstream | 1159893 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 2113554 | 53598650 ~ 53602694 (-) |
