Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560419 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 51525886 ~ 51526519 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785202 | True | 562 | lncRNA | 0.44 | 2 | 51525886 | 51526519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496470 | LOC106588694 | coding | downstream | 22092 | 51486612 ~ 51503794 (-) |
| LOC110496466 | LOC106588698 | coding | downstream | 96510 | 51426740 ~ 51429376 (-) |
| LOC110496464 | LOC106588701 | coding | downstream | 290958 | 51230478 ~ 51234928 (-) |
| LOC110496463 | LOC106588703 | coding | downstream | 311488 | 51213151 ~ 51214398 (-) |
| LOC110496461 | lpcat1 | coding | downstream | 320654 | 51168766 ~ 51205232 (-) |
| trak1b | LOC106588779 | coding | upstream | 652801 | 52179320 ~ 52240648 (-) |
| zgc:110239 | LOC100846955 | coding | upstream | 725928 | 52252447 ~ 52259991 (-) |
| sytl1 | LOC106588777 | coding | upstream | 734848 | 52261367 ~ 52269318 (-) |
| LOC110519830 | LOC106588776 | coding | upstream | 744752 | 52271271 ~ 52281875 (-) |
| LOC110496488 | LOC106588772 | coding | upstream | 790618 | 52317137 ~ 52331561 (-) |
| G1560406 | NA | non-coding | downstream | 40790 | 51484246 ~ 51485096 (-) |
| G1560339 | NA | non-coding | downstream | 70601 | 51381731 ~ 51455285 (-) |
| G1560300 | NA | non-coding | downstream | 219548 | 51306138 ~ 51306338 (-) |
| G1560299 | NA | non-coding | downstream | 222050 | 51303629 ~ 51303836 (-) |
| G1560286 | NA | non-coding | downstream | 241339 | 51284232 ~ 51284547 (-) |
| G1560418 | NA | non-coding | upstream | 97 | 51526616 ~ 51527950 (-) |
| G1560422 | NA | non-coding | upstream | 2414 | 51528933 ~ 51529135 (-) |
| G1560429 | NA | non-coding | upstream | 14543 | 51541062 ~ 51542056 (-) |
| G1560340 | NA | non-coding | upstream | 21890 | 51548409 ~ 51548856 (-) |
| G1560561 | LOC106588786 | non-coding | upstream | 258279 | 51784798 ~ 51789463 (-) |
| thsd7aa | LOC106588717 | other | downstream | 875633 | 50599944 ~ 50755992 (-) |
| G1559205 | NA | other | downstream | 901903 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 1088427 | 50436997 ~ 50437459 (-) |
| G1561167 | NA | other | upstream | 722835 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 830233 | 52352725 ~ 52396978 (-) |
| G1561279 | NA | other | upstream | 1118470 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 2072131 | 53598650 ~ 53602694 (-) |
