Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 51541062 ~ 51542056 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785212 | True | 995 | lncRNA | 0.36 | 1 | 51541062 | 51542056 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496470 | LOC106588694 | coding | downstream | 37268 | 51486612 ~ 51503794 (-) |
| LOC110496466 | LOC106588698 | coding | downstream | 111686 | 51426740 ~ 51429376 (-) |
| LOC110496464 | LOC106588701 | coding | downstream | 306134 | 51230478 ~ 51234928 (-) |
| LOC110496463 | LOC106588703 | coding | downstream | 326664 | 51213151 ~ 51214398 (-) |
| LOC110496461 | lpcat1 | coding | downstream | 335830 | 51168766 ~ 51205232 (-) |
| trak1b | LOC106588779 | coding | upstream | 637264 | 52179320 ~ 52240648 (-) |
| zgc:110239 | LOC100846955 | coding | upstream | 710391 | 52252447 ~ 52259991 (-) |
| sytl1 | LOC106588777 | coding | upstream | 719311 | 52261367 ~ 52269318 (-) |
| LOC110519830 | LOC106588776 | coding | upstream | 729215 | 52271271 ~ 52281875 (-) |
| LOC110496488 | LOC106588772 | coding | upstream | 775081 | 52317137 ~ 52331561 (-) |
| G1560422 | NA | non-coding | downstream | 11927 | 51528933 ~ 51529135 (-) |
| G1560418 | NA | non-coding | downstream | 13112 | 51526616 ~ 51527950 (-) |
| G1560419 | NA | non-coding | downstream | 14543 | 51525886 ~ 51526519 (-) |
| G1560406 | NA | non-coding | downstream | 55966 | 51484246 ~ 51485096 (-) |
| G1560339 | NA | non-coding | downstream | 85777 | 51381731 ~ 51455285 (-) |
| G1560340 | NA | non-coding | upstream | 6353 | 51548409 ~ 51548856 (-) |
| G1560561 | LOC106588786 | non-coding | upstream | 242742 | 51784798 ~ 51789463 (-) |
| G1560596 | NA | non-coding | upstream | 253430 | 51795486 ~ 51800783 (-) |
| G1560619 | NA | non-coding | upstream | 314640 | 51856696 ~ 51860811 (-) |
| G1560579 | NA | non-coding | upstream | 321473 | 51863529 ~ 51866710 (-) |
| thsd7aa | LOC106588717 | other | downstream | 890809 | 50599944 ~ 50755992 (-) |
| G1559205 | NA | other | downstream | 917079 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 1103603 | 50436997 ~ 50437459 (-) |
| G1561167 | NA | other | upstream | 707298 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 814696 | 52352725 ~ 52396978 (-) |
| G1561279 | NA | other | upstream | 1102933 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 2056594 | 53598650 ~ 53602694 (-) |
