Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561130 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52126649 ~ 52169286 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786008 | True | 565 | lncRNA | 0.44 | 2 | 52126649 | 52169286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496470 | LOC106588694 | coding | downstream | 622855 | 51486612 ~ 51503794 (-) |
| LOC110496466 | LOC106588698 | coding | downstream | 697273 | 51426740 ~ 51429376 (-) |
| LOC110496464 | LOC106588701 | coding | downstream | 891721 | 51230478 ~ 51234928 (-) |
| LOC110496463 | LOC106588703 | coding | downstream | 912251 | 51213151 ~ 51214398 (-) |
| LOC110496461 | lpcat1 | coding | downstream | 921417 | 51168766 ~ 51205232 (-) |
| trak1b | LOC106588779 | coding | upstream | 10034 | 52179320 ~ 52240648 (-) |
| zgc:110239 | LOC100846955 | coding | upstream | 83161 | 52252447 ~ 52259991 (-) |
| sytl1 | LOC106588777 | coding | upstream | 92081 | 52261367 ~ 52269318 (-) |
| LOC110519830 | LOC106588776 | coding | upstream | 101985 | 52271271 ~ 52281875 (-) |
| LOC110496488 | LOC106588772 | coding | upstream | 147851 | 52317137 ~ 52331561 (-) |
| G1560658 | LOC106588725 | non-coding | downstream | 148256 | 51977466 ~ 51978393 (-) |
| G1560706 | NA | non-coding | downstream | 149925 | 51974939 ~ 51976724 (-) |
| G1560701 | NA | non-coding | downstream | 155611 | 51967090 ~ 51971038 (-) |
| G1560660 | rl14 | non-coding | downstream | 212748 | 51910996 ~ 51913901 (-) |
| G1560618 | NA | non-coding | downstream | 252603 | 51868916 ~ 51874046 (-) |
| G1561154 | NA | non-coding | upstream | 552 | 52169838 ~ 52170109 (-) |
| G1561155 | NA | non-coding | upstream | 2418 | 52171704 ~ 52172049 (-) |
| G1561201 | NA | non-coding | upstream | 71992 | 52241278 ~ 52241515 (-) |
| G1561204 | NA | non-coding | upstream | 78742 | 52248028 ~ 52248852 (-) |
| G1560339 | NA | other | downstream | 671364 | 51381731 ~ 51455285 (-) |
| thsd7aa | LOC106588717 | other | downstream | 1476396 | 50599944 ~ 50755992 (-) |
| G1559205 | NA | other | downstream | 1502666 | 50623091 ~ 50623983 (-) |
| G1558916 | NA | other | downstream | 1689190 | 50436997 ~ 50437459 (-) |
| G1561167 | NA | other | upstream | 80068 | 52249354 ~ 52250489 (-) |
| LOC110496491 | LOC106588724 | other | upstream | 187466 | 52352725 ~ 52396978 (-) |
| G1561279 | NA | other | upstream | 475703 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 1429364 | 53598650 ~ 53602694 (-) |
