G1560831


Basic Information

Item Value
gene id G1560831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52171768 ~ 52171972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1785666
caggtggactttgtagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgagctcaatttcgagtcattatggggtattatgtgtggATAGATGAGTTTTATTTTTtggtcaattttagaataaggctgttacttaacaaaatatggaaacagTGAAGGGGTCTGACTTCTTTATGAATGCACTCTATATGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1785666 True 205 lncRNA 0.37 1 52171768 52171972

Neighbor

gene id symbol gene type direction distance location
cck-n cck-n coding upstream 11014 52155121 ~ 52160754 (+)
LOC110496482 LOC106588780 coding upstream 88298 52036488 ~ 52083470 (+)
topaz1 topaz1 coding upstream 151409 52003041 ~ 52020359 (+)
LOC110496480 LOC106588725 coding upstream 189783 51976267 ~ 51981985 (+)
LOC118940997 NA coding upstream 196367 51974037 ~ 51975401 (+)
si:dkey-166k12.1 LOC106588778 coding downstream 63425 52235397 ~ 52245444 (+)
LOC110496487 LOC106588732 coding downstream 122696 52294668 ~ 52297220 (+)
LOC110496490 NA coding downstream 168309 52340281 ~ 52345668 (+)
zcchc17 zcchc17 coding downstream 391558 52563530 ~ 52570280 (+)
dclk3 LOC106588742 coding downstream 428413 52600385 ~ 52606655 (+)
G1560830 NA non-coding upstream 449 52171000 ~ 52171319 (+)
G1560829 NA non-coding upstream 870 52170522 ~ 52170898 (+)
G1559951 NA non-coding upstream 180190 51990629 ~ 51991578 (+)
G1559938 NA non-coding upstream 209568 51960952 ~ 51962200 (+)
G1559729 NA non-coding upstream 574378 51593546 ~ 51597390 (+)
G1560832 NA non-coding downstream 183 52172155 ~ 52172573 (+)
G1560836 NA non-coding downstream 7360 52179332 ~ 52240688 (+)
G1560866 NA non-coding downstream 68827 52240799 ~ 52241048 (+)
G1560813 NA non-coding downstream 74880 52246852 ~ 52247826 (+)
G1560869 NA non-coding downstream 76137 52248109 ~ 52248605 (+)
G1559041 thsd7a other upstream 1536202 50633743 ~ 50635566 (+)
G1558443 NA other upstream 1951641 50219754 ~ 50220127 (+)
G1557814 NA other upstream 2410802 49760428 ~ 49760966 (+)
G1557717 NA other upstream 2625959 49545549 ~ 49545809 (+)
G1560811 LOC100846955 other downstream 84664 52256636 ~ 52257530 (+)
G1560911 NA other downstream 183325 52355297 ~ 52355835 (+)
G1560957 NA other downstream 269174 52441146 ~ 52441941 (+)
snrpd1 snrpd1 other downstream 1003750 53175661 ~ 53178938 (+)
G1561544 LOC106588750 other downstream 1105818 53277790 ~ 53288465 (+)

Expression


Co-expression Network