Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560811 |
| gene name | LOC100846955 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52256636 ~ 52257530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: digestive cysteine proteinase 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785643 | True | 816 | TUCP | 0.53 | 2 | 52256636 | 52257530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-166k12.1 | LOC106588778 | coding | upstream | 11192 | 52235397 ~ 52245444 (+) |
| cck-n | cck-n | coding | upstream | 95882 | 52155121 ~ 52160754 (+) |
| LOC110496482 | LOC106588780 | coding | upstream | 173166 | 52036488 ~ 52083470 (+) |
| topaz1 | topaz1 | coding | upstream | 236277 | 52003041 ~ 52020359 (+) |
| LOC110496480 | LOC106588725 | coding | upstream | 274651 | 51976267 ~ 51981985 (+) |
| LOC110496487 | LOC106588732 | coding | downstream | 37138 | 52294668 ~ 52297220 (+) |
| LOC110496490 | NA | coding | downstream | 82751 | 52340281 ~ 52345668 (+) |
| zcchc17 | zcchc17 | coding | downstream | 306000 | 52563530 ~ 52570280 (+) |
| dclk3 | LOC106588742 | coding | downstream | 342855 | 52600385 ~ 52606655 (+) |
| cyhr1 | LOC106588755 | coding | downstream | 383707 | 52641237 ~ 52644819 (+) |
| G1560810 | LOC100846955 | non-coding | upstream | 2790 | 52252375 ~ 52253846 (+) |
| G1560869 | NA | non-coding | upstream | 8031 | 52248109 ~ 52248605 (+) |
| G1560813 | NA | non-coding | upstream | 8810 | 52246852 ~ 52247826 (+) |
| G1560866 | NA | non-coding | upstream | 15588 | 52240799 ~ 52241048 (+) |
| G1560836 | NA | non-coding | upstream | 15948 | 52179332 ~ 52240688 (+) |
| G1560812 | NA | non-coding | downstream | 3251 | 52260781 ~ 52261180 (+) |
| G1560877 | NA | non-coding | downstream | 5870 | 52263400 ~ 52265153 (+) |
| G1560896 | NA | non-coding | downstream | 42829 | 52300359 ~ 52300575 (+) |
| G1560904 | NA | non-coding | downstream | 51095 | 52308625 ~ 52308953 (+) |
| G1559041 | thsd7a | other | upstream | 1621070 | 50633743 ~ 50635566 (+) |
| G1558443 | NA | other | upstream | 2036509 | 50219754 ~ 50220127 (+) |
| G1557814 | NA | other | upstream | 2495670 | 49760428 ~ 49760966 (+) |
| G1557717 | NA | other | upstream | 2710827 | 49545549 ~ 49545809 (+) |
| G1560911 | NA | other | downstream | 97767 | 52355297 ~ 52355835 (+) |
| G1560957 | NA | other | downstream | 183616 | 52441146 ~ 52441941 (+) |
| snrpd1 | snrpd1 | other | downstream | 918192 | 53175661 ~ 53178938 (+) |
| G1561544 | LOC106588750 | other | downstream | 1020260 | 53277790 ~ 53288465 (+) |
| LOC110514975 | LOC106588804 | other | downstream | 1460839 | 53713836 ~ 53730416 (+) |
