G1561219



Basic Information


Item Value
gene id G1561219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52294559 ~ 52295157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1786110
TAGCCTATATGTATGTCTAGCCAATGCTTTTAAATATACAAGGGGGAGTGAACGAGTACACACTCCAGATAGAAGGTGGAGAAGACAGAATTGGAATGCAGCCCTTCTGGTGTCTGTTCTCCACTCTTCTACTACAGTgccttgtggtgtgttgtgtaaCAGATGCCCACTAGCTTGGAAAACCATGTCCTCATGCTTTATCTCTGATATAAAttgaggtttacatacactgcccccacacacagactgacctacagacagacaggacagaagaTCTTACCTTCTAACAAGACCTTGATCACGATTCTTTCAAATCAGCTCTGTTGACAGAGAATCCAGGAAACTGTGATGCCGTGATGCTGTCTGTGTCCAGCTTGTCTCCTGGTATATCGATGGTCGGTAATATCTCAGTAAGGCTTGTCTGTCCCCATCAGAGTAATAACATATCCTCCTTGCGAATAGGTTGTCTCCGTTTCTCCGGTGGTGAACACCGGAATGACTGGATGGATCTCCTGCGCGAATGTTCCTTCACTAGGGAAGGTCTGACTGACGTCAGTGATGGCAGGCTTTAGCCAATGAGGCGCTCGGAGAGACGGGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1786110 True 599 lncRNA 0.47 1 52294559 52295157

Neighbor


gene id symbol gene type direction distance location
LOC110519830 LOC106588776 coding downstream 12684 52271271 ~ 52281875 (-)
sytl1 LOC106588777 coding downstream 25241 52261367 ~ 52269318 (-)
zgc:110239 LOC100846955 coding downstream 34568 52252447 ~ 52259991 (-)
trak1b LOC106588779 coding downstream 74711 52179320 ~ 52240648 (-)
LOC110496470 LOC106588694 coding downstream 790765 51486612 ~ 51503794 (-)
LOC110496488 LOC106588772 coding upstream 21980 52317137 ~ 52331561 (-)
LOC110496489 LOC106588773 coding upstream 36817 52331974 ~ 52351917 (-)
LOC110496491 LOC106588724 coding upstream 57568 52352725 ~ 52396978 (-)
LOC110496493 LOC106588771 coding upstream 103501 52398658 ~ 52428130 (-)
sesn2 LOC106588768 coding upstream 133068 52428225 ~ 52436609 (-)
G1561213 NA non-coding downstream 7570 52285836 ~ 52286989 (-)
G1561164 NA non-coding downstream 33380 52260778 ~ 52261179 (-)
G1561166 NA non-coding downstream 33857 52260449 ~ 52260702 (-)
G1561205 NA non-coding downstream 42741 52251476 ~ 52251818 (-)
G1561204 NA non-coding downstream 45707 52248028 ~ 52248852 (-)
G1561220 LOC106588732 non-coding upstream 553 52295710 ~ 52297156 (-)
G1561221 NA non-coding upstream 4505 52299662 ~ 52300033 (-)
G1561224 NA non-coding upstream 8101 52303258 ~ 52303588 (-)
G1561225 NA non-coding upstream 9188 52304345 ~ 52304851 (-)
G1561230 NA non-coding upstream 12265 52307422 ~ 52307665 (-)
G1561167 NA other downstream 44070 52249354 ~ 52250489 (-)
G1560339 NA other downstream 839274 51381731 ~ 51455285 (-)
LOC110496463 LOC106588703 other downstream 1080415 51213151 ~ 51214398 (-)
thsd7aa LOC106588717 other downstream 1644306 50599944 ~ 50755992 (-)
G1561279 NA other upstream 349832 52644989 ~ 52647777 (-)
G1562762 NA other upstream 1303493 53598650 ~ 53602694 (-)
tomm7 NA other upstream 1326743 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 1457249 53752406 ~ 53752683 (-)

Expression



Co-expression Network