Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561224 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52303258 ~ 52303588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106612145 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786115 | True | 331 | lncRNA | 0.55 | 1 | 52303258 | 52303588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519830 | LOC106588776 | coding | downstream | 21383 | 52271271 ~ 52281875 (-) |
| sytl1 | LOC106588777 | coding | downstream | 33940 | 52261367 ~ 52269318 (-) |
| zgc:110239 | LOC100846955 | coding | downstream | 43267 | 52252447 ~ 52259991 (-) |
| trak1b | LOC106588779 | coding | downstream | 83410 | 52179320 ~ 52240648 (-) |
| LOC110496470 | LOC106588694 | coding | downstream | 799464 | 51486612 ~ 51503794 (-) |
| LOC110496488 | LOC106588772 | coding | upstream | 13549 | 52317137 ~ 52331561 (-) |
| LOC110496489 | LOC106588773 | coding | upstream | 28386 | 52331974 ~ 52351917 (-) |
| LOC110496491 | LOC106588724 | coding | upstream | 49137 | 52352725 ~ 52396978 (-) |
| LOC110496493 | LOC106588771 | coding | upstream | 95070 | 52398658 ~ 52428130 (-) |
| sesn2 | LOC106588768 | coding | upstream | 124637 | 52428225 ~ 52436609 (-) |
| G1561221 | NA | non-coding | downstream | 3225 | 52299662 ~ 52300033 (-) |
| G1561220 | LOC106588732 | non-coding | downstream | 6102 | 52295710 ~ 52297156 (-) |
| G1561219 | NA | non-coding | downstream | 8101 | 52294559 ~ 52295157 (-) |
| G1561213 | NA | non-coding | downstream | 16269 | 52285836 ~ 52286989 (-) |
| G1561164 | NA | non-coding | downstream | 42079 | 52260778 ~ 52261179 (-) |
| G1561225 | NA | non-coding | upstream | 757 | 52304345 ~ 52304851 (-) |
| G1561230 | NA | non-coding | upstream | 3834 | 52307422 ~ 52307665 (-) |
| G1561233 | NA | non-coding | upstream | 6720 | 52310308 ~ 52310533 (-) |
| G1561239 | NA | non-coding | upstream | 44293 | 52347881 ~ 52350303 (-) |
| G1561167 | NA | other | downstream | 52769 | 52249354 ~ 52250489 (-) |
| G1560339 | NA | other | downstream | 847973 | 51381731 ~ 51455285 (-) |
| LOC110496463 | LOC106588703 | other | downstream | 1089114 | 51213151 ~ 51214398 (-) |
| thsd7aa | LOC106588717 | other | downstream | 1653005 | 50599944 ~ 50755992 (-) |
| G1561279 | NA | other | upstream | 341401 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 1295062 | 53598650 ~ 53602694 (-) |
| tomm7 | NA | other | upstream | 1318312 | 53621900 ~ 53628443 (-) |
| G1562816 | LOC100136012 | other | upstream | 1448818 | 53752406 ~ 53752683 (-) |
