Gene
RNA
| Item | Value |
|---|---|
| gene id | G1560871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52317143 ~ 52318321 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785709 | True | 989 | lncRNA | 0.40 | 3 | 52317143 | 52318321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496487 | LOC106588732 | coding | upstream | 19923 | 52294668 ~ 52297220 (+) |
| si:dkey-166k12.1 | LOC106588778 | coding | upstream | 71699 | 52235397 ~ 52245444 (+) |
| cck-n | cck-n | coding | upstream | 156389 | 52155121 ~ 52160754 (+) |
| LOC110496482 | LOC106588780 | coding | upstream | 233673 | 52036488 ~ 52083470 (+) |
| topaz1 | topaz1 | coding | upstream | 296784 | 52003041 ~ 52020359 (+) |
| LOC110496490 | NA | coding | downstream | 21960 | 52340281 ~ 52345668 (+) |
| zcchc17 | zcchc17 | coding | downstream | 245209 | 52563530 ~ 52570280 (+) |
| dclk3 | LOC106588742 | coding | downstream | 282064 | 52600385 ~ 52606655 (+) |
| cyhr1 | LOC106588755 | coding | downstream | 322916 | 52641237 ~ 52644819 (+) |
| susd5 | LOC106588743 | coding | downstream | 544359 | 52862680 ~ 52892459 (+) |
| G1560904 | NA | non-coding | upstream | 8190 | 52308625 ~ 52308953 (+) |
| G1560896 | NA | non-coding | upstream | 16568 | 52300359 ~ 52300575 (+) |
| G1560877 | NA | non-coding | upstream | 51990 | 52263400 ~ 52265153 (+) |
| G1560812 | NA | non-coding | upstream | 55963 | 52260781 ~ 52261180 (+) |
| G1560876 | LOC106588772 | non-coding | downstream | 4061 | 52322382 ~ 52331632 (+) |
| G1560870 | LOC106588771 | non-coding | downstream | 82263 | 52400584 ~ 52402286 (+) |
| G1560947 | NA | non-coding | downstream | 109921 | 52428242 ~ 52432448 (+) |
| G1560957 | NA | non-coding | downstream | 122825 | 52441146 ~ 52441941 (+) |
| G1560932 | NA | non-coding | downstream | 154910 | 52473231 ~ 52474079 (+) |
| G1560811 | LOC100846955 | other | upstream | 59613 | 52256636 ~ 52257530 (+) |
| G1559041 | thsd7a | other | upstream | 1681577 | 50633743 ~ 50635566 (+) |
| G1558443 | NA | other | upstream | 2097016 | 50219754 ~ 50220127 (+) |
| G1557814 | NA | other | upstream | 2556177 | 49760428 ~ 49760966 (+) |
| G1560911 | NA | other | downstream | 36976 | 52355297 ~ 52355835 (+) |
| snrpd1 | snrpd1 | other | downstream | 857401 | 53175661 ~ 53178938 (+) |
| G1561544 | LOC106588750 | other | downstream | 959469 | 53277790 ~ 53288465 (+) |
| LOC110514975 | LOC106588804 | other | downstream | 1400048 | 53713836 ~ 53730416 (+) |
